Gene
| Gene Model ID | pfu_aug1.0_2609.1_37331 |
|---|---|
| Locus | scaffold2609.1 : 63236 ... 72010 : + |
| To GenomeBrowser | scaffold2609.1:63236..72010 |
| Genes list of scaffold | scaffold2609.1 |
| Synonym | pfu_aug2.0_60.1_00148 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2609.1_37331.t1 | 2 | 1 | AXE1 | 16 | 72 | 5.5e-07 | 28.3 | 0.00046 | 0.63 | 8.4 |
| pfu_aug1.0_2609.1_37331.t1 | 1 | 1 | Abhydrolase_5 | 33 | 144 | 9.8e-16 | 57.8 | 8.4e-19 | 1.1e-15 | 57.6 |
| pfu_aug1.0_2609.1_37331.t1 | 1 | 1 | Abhydrolase_6 | 34 | 142 | 9.2e-10 | 38.7 | 7.5e-13 | 1.0e-09 | 38.6 |
| pfu_aug1.0_2609.1_37331.t1 | 2 | 2 | AXE1 | 81 | 125 | 5.5e-07 | 28.3 | 5.2e-07 | 0.00071 | 18.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2609.1_37331.t1 | gi|156371314|ref|XP_001628709.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2609.1_37331.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2609.1_37331.t1 atgaaacttccatttgataatcatcatatcaaaactaaagacggagttaaaattaacatcgtacttatcaaacatgcgaa tccaaatgctccaacttttatttactttcatggaaatgcaggaaatattggtcacagattacccaatgctcagggattac atagtctttgtggttttaatgtgctgttggtagaatatagaggatatggtaaaagtgaaggatcaccctcagaatcaggg ctttatttggatgctgaagcagctatggaatttgtactacagcgtaacgatattaacaagaataagctgttagtatttgg acgctcactaggaggcgctgtagctatatggctggcgtcccagtcaagatatacacaacatatatctgtgctcatcatag aaaacaccttcacatcactgccagacattgctaagaaaatttttgatttttatgttctcaatctagtgcctgaatttctg tacaaaaataagattcttgtgaatagaaaagaagacaaagagattgtaacggtatcaccaaaccttccttacagttccct ttgtggagatgatgaacctttattgattttcaaggtcatgtttactatggagatagcctcaaaattcgtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2609.1_37331.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2609.1_37331.t1 MKLPFDNHHIKTKDGVKINIVLIKHANPNAPTFIYFHGNAGNIGHRLPNAQGLHSLCGFNVLLVEYRGYGKSEGSPSESG LYLDAEAAMEFVLQRNDINKNKLLVFGRSLGGAVAIWLASQSRYTQHISVLIIENTFTSLPDIAKKIFDFYVLNLVPEFL YKNKILVNRKEDKEIVTVSPNLPYSSLCGDDEPLLIFKVMFTMEIASKFV |
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