Gene
| Gene Model ID | pfu_aug1.0_25684.1_33524 |
|---|---|
| Locus | scaffold25684.1 : 1 ... 3445 : + |
| To GenomeBrowser | scaffold25684.1:1..3445 |
| Genes list of scaffold | scaffold25684.1 |
| Synonym | pfu_aug2.0_60.1_00165 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25684.1_33524.t1 | 1 | 1 | Aminotran_5 | 17 | 272 | 3.6e-31 | 108.2 | 1.4e-34 | 5.1e-31 | 107.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25684.1_33524.t1 | gi|198416085|ref|XP_002122357.1| | PREDICTED: uncharacterized aminotransferase C660.12c [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_25684.1_33524.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25684.1_33524.t1 ttgtataacagaaacttggagaagatgaactcccatccagataaatggtttcggagagaggtggagccactgtacaggga ggctaccaaagtggcagcggagtttgttggatgtgactcacaggacctcgtcttcgtccaaaatgttactactgggttca atacagtactgaaatgttacccgttcgttaatggagatggtattcttatagccaatacaacacatggggccgcaaagaat acatgtaaacaactagcttctaacatcaagggtctgaatcttgcatacgttgagttcaatataccaatggagaacgaaga tcaggtagttgagaagtatagggaggcaataaaagtacatcgtaatataaaaatggttgtaatagatcatataacatgcc ccacgtccattgttcttcctgtgaagagaattgccgccctctgccgagagaatgggatactaagtctaatagatggcgct catgctccaggtcaacttgaccttcatatcgatgacctaggcgtcgacttttacactggtaatttgcacaaatgggtgtt cactccacgaggctgtgctttcctttatatcaataggaagcaccatgattggataaagccactagtgacgtcacataatt accagagaggtccttactgggaatttggataccaaggtacaagggacgatacaccttacactgttgttccaaaggcggtg gagttttataataagatgggtggtctaagtcgaattcgagaatacaattcaagcttactagacaaagctgttgaaatgct gtgctcgtcatttgatctcagacggttccccataccaaaatccatggaggcgccatacatgaggcttcttatactaccta aagtccccggatatggcacaacggaaaaagacgccaacaaactatttgctgacatagcagaccagtacaatattgttgtg ttgattgtctcggtgtttgaccatttagtgattcgactatccgctcaagttttcaacacactagatgactatcataaact gggtgatgtctttaagcagttactcacaacaaataacgagaagaattaa |
|
Protein
| Protein ID | pfu_aug1.0_25684.1_33524.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25684.1_33524.t1 LYNRNLEKMNSHPDKWFRREVEPLYREATKVAAEFVGCDSQDLVFVQNVTTGFNTVLKCYPFVNGDGILIANTTHGAAKN TCKQLASNIKGLNLAYVEFNIPMENEDQVVEKYREAIKVHRNIKMVVIDHITCPTSIVLPVKRIAALCRENGILSLIDGA HAPGQLDLHIDDLGVDFYTGNLHKWVFTPRGCAFLYINRKHHDWIKPLVTSHNYQRGPYWEFGYQGTRDDTPYTVVPKAV EFYNKMGGLSRIREYNSSLLDKAVEMLCSSFDLRRFPIPKSMEAPYMRLLILPKVPGYGTTEKDANKLFADIADQYNIVV LIVSVFDHLVIRLSAQVFNTLDDYHKLGDVFKQLLTTNNEKN |
|