Gene
| Gene Model ID | pfu_aug1.0_2547.1_30160 |
|---|---|
| Locus | scaffold2547.1 : 58926 ... 63521 : + |
| To GenomeBrowser | scaffold2547.1:58926..63521 |
| Genes list of scaffold | scaffold2547.1 |
| Synonym | pfu_aug2.0_350.1_00641 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2547.1_30160.t1 | 1 | 1 | Homeobox | 105 | 162 | 4.1e-11 | 42.3 | 1.7e-14 | 8.6e-11 | 41.2 |
| pfu_aug1.0_2547.1_30160.t1 | 1 | 1 | Homeobox_KN | 121 | 160 | 2.3e-10 | 39.9 | 1.1e-13 | 5.7e-10 | 38.7 |
| pfu_aug1.0_2547.1_30160.t1 | 1 | 1 | Homez | 133 | 160 | 8.2e-06 | 24.7 | 3.2e-09 | 1.6e-05 | 23.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2547.1_30160.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2547.1_30160.t1 atggaatctacttgttacagaccaccaactcagtactcagcacctactcagtacccagctgccactcactccgcgtctac tcagtactcagcaacaactcagagccagtatccagtacctactcagacccactactcagcacctactcagacccactact cagtgccaactcaaacccactactcagcaccaacccagacccagtactcagtgcctactcagtatccagtggtcaactac tcagcaaccaccaaccctcagacgccaccaactcatacgcactccaaggatgcacacttcaaactcaacctgcgcaccag acccagcctctcccagcgtgctattcgcctgatggaagtatggtaccacgcccacatcgaccatccgtaccccgacaccc aggacgtcgagaccctagcaaccgccggcaacatcaccgaggagcaggtcaagaagtggttcgccaacaaacgcaacagg agccgcaacatccgcccgatgtcccagatagtgcgccgcaagagacagatccaggccgccgccaccaccaaccgcatcat ccgggtacccagcttgtgttag |
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Protein
| Protein ID | pfu_aug1.0_2547.1_30160.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2547.1_30160.t1 MESTCYRPPTQYSAPTQYPAATHSASTQYSATTQSQYPVPTQTHYSAPTQTHYSVPTQTHYSAPTQTQYSVPTQYPVVNY SATTNPQTPPTHTHSKDAHFKLNLRTRPSLSQRAIRLMEVWYHAHIDHPYPDTQDVETLATAGNITEEQVKKWFANKRNR SRNIRPMSQIVRRKRQIQAAATTNRIIRVPSLC |
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