Gene
| Gene Model ID | pfu_aug1.0_25298.1_11686 |
|---|---|
| Locus | scaffold25298.1 : 1 ... 5863 : + |
| To GenomeBrowser | scaffold25298.1:1..5863 |
| Genes list of scaffold | scaffold25298.1 |
| Synonym | pfu_aug2.0_1.1_03368 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25298.1_11686.t1 | 6 | 1 | Kelch_1 | 47 | 82 | 0.0 | 302.9 | 9.6e-13 | 2.0e-09 | 36.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 1 | Kelch_2 | 47 | 81 | 1.1e-31 | 107.4 | 1.6e-05 | 0.034 | 13.9 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 1 | Kelch_3 | 48 | 92 | 7.9e-38 | 127.8 | 3.5e-07 | 0.00074 | 19.6 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 1 | Kelch_6 | 49 | 85 | 0.0 | 187.8 | 3.3e-08 | 6.9e-05 | 22.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 1 | Kelch_4 | 50 | 81 | 9.19994e-41 | 137.3 | 4.3e-05 | 0.091 | 12.5 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 2 | Kelch_1 | 84 | 123 | 0.0 | 302.9 | 7.7e-18 | 1.6e-14 | 53.1 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 2 | Kelch_4 | 84 | 123 | 9.19994e-41 | 137.3 | 4.0e-09 | 8.4e-06 | 25.4 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 2 | Kelch_2 | 84 | 123 | 1.1e-31 | 107.4 | 9.7e-09 | 2.1e-05 | 24.1 |
| pfu_aug1.0_25298.1_11686.t1 | 5 | 1 | Kelch_5 | 84 | 120 | 1.0e-12 | 47.7 | 0.00034 | 0.73 | 9.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 2 | Kelch_6 | 85 | 123 | 0.0 | 187.8 | 2.1e-10 | 4.5e-07 | 29.7 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 2 | Kelch_3 | 95 | 140 | 7.9e-38 | 127.8 | 4.1e-08 | 8.7e-05 | 22.5 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 3 | Kelch_6 | 132 | 180 | 0.0 | 187.8 | 2.9e-09 | 6.1e-06 | 26.1 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 3 | Kelch_1 | 133 | 177 | 0.0 | 302.9 | 4.2e-19 | 8.8e-16 | 57.1 |
| pfu_aug1.0_25298.1_11686.t1 | 5 | 2 | Kelch_5 | 133 | 153 | 1.0e-12 | 47.7 | 0.0018 | 3.9 | 7.5 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 3 | Kelch_2 | 136 | 176 | 1.1e-31 | 107.4 | 3.2e-05 | 0.067 | 12.9 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 3 | Kelch_4 | 138 | 176 | 9.19994e-41 | 137.3 | 3.0e-09 | 6.4e-06 | 25.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 3 | Kelch_3 | 143 | 187 | 7.9e-38 | 127.8 | 2.3e-09 | 4.9e-06 | 26.5 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 4 | Kelch_1 | 179 | 223 | 0.0 | 302.9 | 1.3e-20 | 2.8e-17 | 61.9 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 4 | Kelch_4 | 179 | 223 | 9.19994e-41 | 137.3 | 2.0e-11 | 4.2e-08 | 32.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 4 | Kelch_2 | 179 | 224 | 1.1e-31 | 107.4 | 5.5e-09 | 1.2e-05 | 24.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 4 | Kelch_6 | 180 | 226 | 0.0 | 187.8 | 1.1e-14 | 2.3e-11 | 43.3 |
| pfu_aug1.0_25298.1_11686.t1 | 5 | 3 | Kelch_5 | 180 | 215 | 1.0e-12 | 47.7 | 1.2e-05 | 0.025 | 14.5 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 4 | Kelch_3 | 189 | 232 | 7.9e-38 | 127.8 | 6.7e-09 | 1.4e-05 | 25.0 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 5 | Kelch_1 | 226 | 268 | 0.0 | 302.9 | 6.5e-18 | 1.4e-14 | 53.3 |
| pfu_aug1.0_25298.1_11686.t1 | 5 | 4 | Kelch_5 | 226 | 254 | 1.0e-12 | 47.7 | 0.0011 | 2.3 | 8.2 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 5 | Kelch_6 | 227 | 273 | 0.0 | 187.8 | 2.3e-11 | 4.8e-08 | 32.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 5 | Kelch_4 | 231 | 267 | 9.19994e-41 | 137.3 | 1.8e-08 | 3.9e-05 | 23.3 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 5 | Kelch_2 | 232 | 267 | 1.1e-31 | 107.4 | 0.00086 | 1.8 | 8.4 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 5 | Kelch_3 | 236 | 281 | 7.9e-38 | 127.8 | 5.7e-09 | 1.2e-05 | 25.3 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 6 | Kelch_1 | 273 | 318 | 0.0 | 302.9 | 1.2e-14 | 2.6e-11 | 42.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 6 | Kelch_4 | 273 | 314 | 9.19994e-41 | 137.3 | 3.8e-06 | 0.0081 | 15.9 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 6 | Kelch_2 | 273 | 317 | 1.1e-31 | 107.4 | 1.1e-07 | 0.00024 | 20.7 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 6 | Kelch_6 | 274 | 321 | 0.0 | 187.8 | 1.7e-11 | 3.5e-08 | 33.2 |
| pfu_aug1.0_25298.1_11686.t1 | 5 | 5 | Kelch_5 | 274 | 305 | 1.0e-12 | 47.7 | 0.026 | 55.0 | 3.8 |
| pfu_aug1.0_25298.1_11686.t1 | 6 | 6 | Kelch_3 | 289 | 326 | 7.9e-38 | 127.8 | 4.7e-05 | 0.1 | 12.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25298.1_11686.t1 | gi|72112336|ref|XP_789626.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_25298.1_11686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25298.1_11686.t1 agtaggcagtgatttactgataaagagcgacgatacgtgtcgagacctgctggacgaggccaagaattacctgctccttc cccaggagagacctctgatgcagggaccaaggacacgcccacggaaaccgatacgctgtggagaagttttgtatgcggtg ggagggtggtgcagtggtgatgcgatatctagtgtagagaagtttgatcctcagaccagcgagtggcgcatggtggcacc catgtctaagcggcgctgtggcgtaggggtggctgtgctaaatgacctgctatatgctgtaggggggcatgatggccaat catacctgaacagtatagaaaggtttgatccccagacaaaccagtggagtggtgatgtagcaccgaccagttcttgccgt acaagtgttggagtagccgtattagaaaattacatgtatgctgtaggtggacaggatggagtatcatgtctaaattttgt agagaggtatgacccgcagttaaacaagtggacaaaggtagcatctatgagtaccagacggctgggtgtaggcgtggcag tattaggggggttcctgtatgctgtgggagggtcggatggtacctcccctctaaatacagttgagcgttacgatccacgc actaacagatggactcccgtgtcccccatgggaacgagacgaaaacacctgggtgtggcagttttcaataacatgatcta tgcagtaggagggagggacgatactacagaactgagtagtgctgagagatataacccacagacaaatacatggcaacctg tggtggccatgacgtcaaggagaagtggggttggtttagctgttgtaaacggtcagttgatggccatcggtggatttgat ggaacaacatatttaaagacaatagaagtgtttgatgccgagacaaactgttggaagttagtgagcggtatgaactacag aagactcgggggtggagtgggcgtggtcagaatgccccagcatgaatctcatttgtggtag |
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Protein
| Protein ID | pfu_aug1.0_25298.1_11686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25298.1_11686.t1 VGSDLLIKSDDTCRDLLDEAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLYAVGGWCSGDAISSVEKFDPQTSEWRMVAP MSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERFDPQTNQWSGDVAPTSSCRTSVGVAVLENYMYAVGGQDGVSCLNFV ERYDPQLNKWTKVASMSTRRLGVGVAVLGGFLYAVGGSDGTSPLNTVERYDPRTNRWTPVSPMGTRRKHLGVAVFNNMIY AVGGRDDTTELSSAERYNPQTNTWQPVVAMTSRRSGVGLAVVNGQLMAIGGFDGTTYLKTIEVFDAETNCWKLVSGMNYR RLGGGVGVVRMPQHESHLW |
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