Gene
| Gene Model ID | pfu_aug1.0_24790.1_69661 |
|---|---|
| Locus | scaffold24790.1 : 1 ... 14709 : - |
| To GenomeBrowser | scaffold24790.1:1..14709 |
| Genes list of scaffold | scaffold24790.1 |
| Synonym | pfu_aug2.0_1.1_03345 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24790.1_69661.t1 | 1 | 1 | VIT_2 | 23 | 98 | 6.9e-12 | 44.6 | 2.9e-15 | 1.4e-11 | 43.6 |
| pfu_aug1.0_24790.1_69661.t1 | 1 | 1 | VIT | 31 | 147 | 4.1e-18 | 65.1 | 1.6e-21 | 7.8e-18 | 64.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24790.1_69661.t1 | gi|148228482|ref|NP_001079962.1| | von Willebrand factor A domain containing 5A [Xenopus laevis] | 9.99995e-41 |
Transcript
| Transcript ID | pfu_aug1.0_24790.1_69661.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24790.1_69661.t1 gtcccggaccctgtgtaatacgtagaccctctgctgtaaggaacagttcaattcgaattataaaatgtggcttgctgatc aacgagaaaggaaatcaagtctccttgaaagaaataaaaactgaagtgtctatcaaaggatttatagctaatgtagagtc taagttggagtacttcaatagagggccggtagccgtagaagcggagtttgtgtttcccctggacagtaagactgctgttt ataattatgaagctgaaattaacggtagacacatagttgccgaatgccaggaacaagcagaggcaattgaaacctacaaa gatgctattgattctggacattcagccatgctcttgtcagaggaagaaaatgccggtgacgtgttcaaactgaggctggg taaccttgatgctcactctaaggctgtgttaacattctcatacgtagtggaacttgacgtagaagttcatggtaccatca ggtttaccttaccaactgtcctatgtcctagatatactccagataatgagtcccttaatggagatgaccaagacgcagca tcacagaatgcaaagacacctgtcttaagctcacctgatgccagcacgcaatacggaagtggaaaattcaaaatgtcttt ttccgcctccgtcagtggtggatataagatcaataaaataacatcacagaatgacgacgtctctgtcagtttggaaggaa acaaaactgatgcaaaagttagcctgaaagaatcattcaagcgtgaccatgatctgagctttgacattcagtacaaagac tttgacaaaccagagattgtacttgagaaaggaatccctgataaaggtaaggttaagattgtactggagaaagaaatccc tgataaaggtaaggttaagattgtacaggagaaaggaatctctgataaaggtaaggttaagattgtacaggagaaaggaa tctctgaaaaaggtaaggttaagattgtactggagaaaggaatctctgatataggtcaggttgagattgtactggacgaa agaatctccgataaaggtaaggttaagattgtactggacgaaagaatctccgataaaggtaaggttaagattgtactgga gaaaggaatctctgctaaaggacaatttaagattgtactggagaaaggaatctctgataaagataaagttaagattgtac acctgataaaggtaccatatgactcctccctgactttgtctgctgtgtgtggcgatcagaagataagccacaaagtgagc tttgacctgagtaaagtggaatcatcaagtgggtcggcaccacttcatagattggctgctaaagctcaattagaacttat ggaacagatagaagagatggggaaaacaccat |
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Protein
| Protein ID | pfu_aug1.0_24790.1_69661.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24790.1_69661.t1 PGPCVIRRPSAVRNSSIRIIKCGLLINEKGNQVSLKEIKTEVSIKGFIANVESKLEYFNRGPVAVEAEFVFPLDSKTAVY NYEAEINGRHIVAECQEQAEAIETYKDAIDSGHSAMLLSEEENAGDVFKLRLGNLDAHSKAVLTFSYVVELDVEVHGTIR FTLPTVLCPRYTPDNESLNGDDQDAASQNAKTPVLSSPDASTQYGSGKFKMSFSASVSGGYKINKITSQNDDVSVSLEGN KTDAKVSLKESFKRDHDLSFDIQYKDFDKPEIVLEKGIPDKGKVKIVLEKEIPDKGKVKIVQEKGISDKGKVKIVQEKGI SEKGKVKIVLEKGISDIGQVEIVLDERISDKGKVKIVLDERISDKGKVKIVLEKGISAKGQFKIVLEKGISDKDKVKIVH LIKVPYDSSLTLSAVCGDQKISHKVSFDLSKVESSSGSAPLHRLAAKAQLELMEQIEEMGKTP |
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