Gene
| Gene Model ID | pfu_aug1.0_247.1_07427 |
|---|---|
| Locus | scaffold247.1 : 20260 ... 31195 : - |
| To GenomeBrowser | scaffold247.1:20260..31195 |
| Genes list of scaffold | scaffold247.1 |
| Synonym | pfu_aug2.0_1763.1_11849 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_247.1_07427.t1 | 1 | 1 | rve | 586 | 690 | 6.2e-17 | 61.8 | 7.3e-20 | 1.8e-16 | 60.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_247.1_07427.t1 | gi|301604057|ref|XP_002931684.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_247.1_07427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_247.1_07427.t1 atgcatagaattacgtgccctaaatgtccattaacattttcaagaaaagatgtgttgttgagacatcatcgacataaaca cagggaacatgacttatatcatcaaaactgtttggtgcaaccaacaacacaggaacagcagagcagtcaagcgtatctgc caccgccgccaccgccgccgccgcaaagcagtcaagcgtatccaccgccgccgtcgccaccaccgccgccgccgccacag cagcagagttttgtttttaaacatccctttacagccaacgtatcgggtcctacggcatgcgggaagacttattttgtcaa aaccttactgcaacgatgtaccaagaagttatcaccttatcctgagagaattatttggttgtataaacgatggcagcctc tctatgaagaaattaaagctaaggtgtatccccgagtcgaatttataaaaggcattcccttggacatggaacaggatact tttattcatcctagcaagcgaaacttggtcattttagatgatttaatgtcatcgtcggccaaagaccctcggatcaatga gttatttacggagggtagtcatcacaggaatttttcggtgattgccttgaaccaaaacttgtacttcaacaagcctccta cccagagaaggaattgtcattatctggtcatgtttaataatccagtcgatcaacaacagatcatgaccttggccaggcag atgtatccagaaaatcctcaacatctcatccgtcattttaaggatgctacctcgaagccttatgggcatttggtcattga cctgaaacctttcacagtcaaacatcaacgcctacgcacagacatatttgaccaatcggatgatccgaaggacccaacat gtcagttcgaaaaccacacggatcagataaataaggatgatcaaaaggacatggatcattctgaacacatctctgctacc gatcagacgtgttttgaagaagagaaaatgcattcatgtgacgattgtggtctcgtctttgaaaacatacacgatttaca aaggcatgtcaaatcatggtgtccagaaaacagaaaaagaaagcatgatgaagatgatgaaagaatctataaaaagatga gattagacgatgtctcatccgaagaagacgatgactcagctgatgaagatgatgatgatgatggatttgatttcatcgtt aatgaagtatgggatgatcacagaacgcaatacgatcgcaaaatcaagcaactcatggaagatgacatgtcaaagaagga tgctaaagaggaggctagcgatatcatgttatctaaagaccggtccctattcatgaagaaaaataaagattttctcattc atatacatgaattaaatgctagcagacttcataggatgatcaaaaaggagataacagaattggttgcagagaaggacgtg catatagaccaggcgatcgaacaagtgatcagacgtcacagaactgattttgactccctcttcgaaaactacgatgagag tgatggcgaagatgacagcgaagatgatatggataccgaagacaatagaagtttctctggaccggataaactatatcgct atgtcaagaaggcggggaaatacgtcatcagcaaataccggatccggaaatggttacaaagacaggaaccctatagcttt cagagaccccttgtgagaaagttcaagagaaacacggtaatcaccttgggtatcgacgatcaatgggatgccgacctaat ggatatgaccaagtttgcaaaagagaacgatggatatgcctacatcctcgtagtcattgatattttttcaaaatatctat ggctaagacccacgctggataaacgaggagaaagtatcacgactgcctttcaagcgattttgggagaagggagacaaccg agcagaatccgtacagataaaggccaagaattcaaatctaggacctttaatgccctcctaaaaagaaacaatatcgagca ttcatatgcacagaatacagaaataaaagccaactatgcagaacgagtcatcaagacggtcaaagccaaaatatatcgat acatgacgtataagcaatcgcagcgctatgtagatcgcttggaagacttcaacaccaactataactctacgtttcatcgt acgatcgtcggcgatcgagcgagggtgactcatatacggaatccttttacccgggaatacgatcaaaagtggtctggaga attattcgtcattgccgatagacgaataagaggcggaattctcgtttacaaactcaaagactatttggacgaagatatca tcggcaccttttatcaaccggaactgcagaaagtggacaccagagaggatgacaagcatttaagtggaaaagtgtcgata aagccgtggaagctgtggttaaaaaaacataagaaagactatgacgaactgtttgacgagaatgaaagtgaaagtaatga aaacagtgacaatgaagaatcatatgaaaccgactga |
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Protein
| Protein ID | pfu_aug1.0_247.1_07427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_247.1_07427.t1 MHRITCPKCPLTFSRKDVLLRHHRHKHREHDLYHQNCLVQPTTQEQQSSQAYLPPPPPPPPQSSQAYPPPPSPPPPPPPQ QQSFVFKHPFTANVSGPTACGKTYFVKTLLQRCTKKLSPYPERIIWLYKRWQPLYEEIKAKVYPRVEFIKGIPLDMEQDT FIHPSKRNLVILDDLMSSSAKDPRINELFTEGSHHRNFSVIALNQNLYFNKPPTQRRNCHYLVMFNNPVDQQQIMTLARQ MYPENPQHLIRHFKDATSKPYGHLVIDLKPFTVKHQRLRTDIFDQSDDPKDPTCQFENHTDQINKDDQKDMDHSEHISAT DQTCFEEEKMHSCDDCGLVFENIHDLQRHVKSWCPENRKRKHDEDDERIYKKMRLDDVSSEEDDDSADEDDDDDGFDFIV NEVWDDHRTQYDRKIKQLMEDDMSKKDAKEEASDIMLSKDRSLFMKKNKDFLIHIHELNASRLHRMIKKEITELVAEKDV HIDQAIEQVIRRHRTDFDSLFENYDESDGEDDSEDDMDTEDNRSFSGPDKLYRYVKKAGKYVISKYRIRKWLQRQEPYSF QRPLVRKFKRNTVITLGIDDQWDADLMDMTKFAKENDGYAYILVVIDIFSKYLWLRPTLDKRGESITTAFQAILGEGRQP SRIRTDKGQEFKSRTFNALLKRNNIEHSYAQNTEIKANYAERVIKTVKAKIYRYMTYKQSQRYVDRLEDFNTNYNSTFHR TIVGDRARVTHIRNPFTREYDQKWSGELFVIADRRIRGGILVYKLKDYLDEDIIGTFYQPELQKVDTREDDKHLSGKVSI KPWKLWLKKHKKDYDELFDENESESNENSDNEESYETD |
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