Gene
| Gene Model ID | pfu_aug1.0_2468.1_01112 |
|---|---|
| Locus | scaffold2468.1 : 81818 ... 91445 : - |
| To GenomeBrowser | scaffold2468.1:81818..91445 |
| Genes list of scaffold | scaffold2468.1 |
| Synonym | pfu_aug2.0_2511.1_05562 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2468.1_01112.t1 | 2 | 1 | zf-B_box | 13 | 47 | 4.6e-17 | 61.6 | 1.6e-12 | 3.1e-09 | 36.5 |
| pfu_aug1.0_2468.1_01112.t1 | 2 | 2 | zf-B_box | 363 | 398 | 4.6e-17 | 61.6 | 2.9e-13 | 5.4e-10 | 38.9 |
Transcript
| Transcript ID | pfu_aug1.0_2468.1_01112.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2468.1_01112.t1 atggcttctagtttatacaaggctcagtatactctaaatgtctgtgaaaaacacaacaaaaaggaaattcgtgcgtattg taaaacatgtcaggaaaaaatttgttcgttgtgtattaaagagagtcattattcacatgattgggacataattacagaca tacttaaagagaaaagacacagtttaccagaggaatgtagaaaaattcgtgcgactcaacttccatgtttaagaaacgaa ttagatcgattcgaagaaaaaatacaagagcaagatgctcgttttgaacaaaacaaatctgctttgaatggttcgcggaa gagctacatcgatgaaatcaacaaattgtttgatgggaaaatagacgaatgtcgtaataataccgcgatagctaaacaaa tatatttagacgaacgtgaaggacttaaaaggaaagtagaatatctggacatgattaccacgtccttagacaaggatatc aatactttgcctgaccatgatattctggacatggagaaggagatgagggatgaactggaaagggttctcttttacagtgc tgataagtacacgtgctctacagtatttgttcccgggcagattattgtagagactctaacggacatgataggtgagttcc acttcgtgtctgtggaggaacaaaatgatatttacaaatatcctaatggtatagagactgttaaacctatatctgaaaca tatgcttggatcatgaccgaggtcgacgaccatccaaaactgattgatagaacagggacactatctagaataatgccagt tagttgtacggatcttatcatatcagacaaaggaaacatcgttcttacatcttcgaacaaagacatcgtttcagttctca cacaagaaggacagatgataacagagttcaacactaaaccattatatcctgcgtggatcagtaaaacacagaaagatgaa ctcctagtcacaatgtgggacaaaggtgacgaatttgacttggtatcatctagccgacgtgtcgttcagcgtttgactct cacaggcgatgtgctccagacatacgagttcatggacgatggccagacaagactttgtgaaaagcacgacaaaaaggaga ttaatgcgtactgtaagacatgtcaggaaaaagtatgttcatcatgtattaaggaggaccataattcacatgactgggac atgatcgcagatttacttagggagaaaaaacacactttacctgaggagtgtaaagaaattcgtgctacacaacttccgta tttgagaaacgaaatagatcgactcgaagataaaatacaggaacaagatgctctttttgaacaagacaaatcagcgataa atgaaacccgaaaaagctatattgatgaaatcaataaattgttcaatgggaggattgacgaatgtcgtaaaaattccgag atatcaaaacgaaaatttaaggatgaacgcgacggattgaaaatgaaagtagaatacctggatatgattacaacatcctt agacaaagagattactactttacccaaccatgacattctggacatggagatggagatgagaaaagaacttaaaaaggctt tctcttacagtgctgataaggacacatgtaccactgggtttgtacccaggaagattaatgtggagacaatgaagaaaatg ataggtgaattccattccgtgtctgttgaagaactacatgatataggtccgtattccgaatccatacaaacaataaaacc tgtttctgacacagaggcctggatgatccgtgaagataattatccagaattaattgataggaatgggacgcaaataaaag atattcaaacgaagtgtaaagaccttataatctctgaacaaggaaatatcgtgctgacgtcatcaagatcccgaattttg attctcgatcaaaacgggaaaaagaaaataaccgaatttaatacaaaaccattaaggcccactttgattagtaaaacaga gaacgacgaaatccttgtaacactgcgggaaaagggtgacgactacaatcttcttcctaccagccgccgagtggttcagc gtatgacactcgcaggagatgtgctcaacacgtacgagttcacggaggatggcaagacaagattatttactctgcctatg acaacggcagaaaacaagaacaatgacgtatgtatcgtcaattggatcagtgatgtcagcggagaactagtagtactata caaagatggacgtcagaagtttacgtatagaggagaagggctgaatattgaaaacttcctacctacagatgttgcatgcg attcaaaatgtaatatcatcttctcagaagcaaagaacaattttaatgcaatccatatactgggtgcagatgggatattt ctatgcacattatgtcagtgtggacagttttttccctatgtaatcgccgtctacagtgataaaatttggtgtgggtttgg tcaaggcagagtgaaagtttatagatatcacataaattga |
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Protein
| Protein ID | pfu_aug1.0_2468.1_01112.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2468.1_01112.t1 MASSLYKAQYTLNVCEKHNKKEIRAYCKTCQEKICSLCIKESHYSHDWDIITDILKEKRHSLPEECRKIRATQLPCLRNE LDRFEEKIQEQDARFEQNKSALNGSRKSYIDEINKLFDGKIDECRNNTAIAKQIYLDEREGLKRKVEYLDMITTSLDKDI NTLPDHDILDMEKEMRDELERVLFYSADKYTCSTVFVPGQIIVETLTDMIGEFHFVSVEEQNDIYKYPNGIETVKPISET YAWIMTEVDDHPKLIDRTGTLSRIMPVSCTDLIISDKGNIVLTSSNKDIVSVLTQEGQMITEFNTKPLYPAWISKTQKDE LLVTMWDKGDEFDLVSSSRRVVQRLTLTGDVLQTYEFMDDGQTRLCEKHDKKEINAYCKTCQEKVCSSCIKEDHNSHDWD MIADLLREKKHTLPEECKEIRATQLPYLRNEIDRLEDKIQEQDALFEQDKSAINETRKSYIDEINKLFNGRIDECRKNSE ISKRKFKDERDGLKMKVEYLDMITTSLDKEITTLPNHDILDMEMEMRKELKKAFSYSADKDTCTTGFVPRKINVETMKKM IGEFHSVSVEELHDIGPYSESIQTIKPVSDTEAWMIREDNYPELIDRNGTQIKDIQTKCKDLIISEQGNIVLTSSRSRIL ILDQNGKKKITEFNTKPLRPTLISKTENDEILVTLREKGDDYNLLPTSRRVVQRMTLAGDVLNTYEFTEDGKTRLFTLPM TTAENKNNDVCIVNWISDVSGELVVLYKDGRQKFTYRGEGLNIENFLPTDVACDSKCNIIFSEAKNNFNAIHILGADGIF LCTLCQCGQFFPYVIAVYSDKIWCGFGQGRVKVYRYHIN |
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