Gene
| Gene Model ID | pfu_aug1.0_24562.1_04385 |
|---|---|
| Locus | scaffold24562.1 : 11771 ... 25420 : - |
| To GenomeBrowser | scaffold24562.1:11771..25420 |
| Genes list of scaffold | scaffold24562.1 |
| Synonym | pfu_aug2.0_1240.1_01495 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24562.1_04385.t1 | 2 | 1 | MARVEL | 1 | 110 | 2.9e-14 | 53.1 | 1.7e-13 | 1.2e-09 | 38.0 |
| pfu_aug1.0_24562.1_04385.t1 | 2 | 2 | MARVEL | 140 | 168 | 2.9e-14 | 53.1 | 2.1e-07 | 0.0015 | 18.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24562.1_04385.t1 | gi|269785027|ref|NP_001161665.1| | synaptoporin-like protein [Saccoglossus kowalevskii] | 8.0e-27 |
Transcript
| Transcript ID | pfu_aug1.0_24562.1_04385.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24562.1_04385.t1 gttctgtccatatttgcgtttgccactacaaccagtgtgaacaccatgttgggctttgaagccaagaactgcccaccgaa caccaatcctatcagggaatctgtgcaggtggcttatccttttgatttagagcatgaaagctacactacaccattatgta gactggacaatagtacgatcgtgaattcagcgctactccaagggtccaagtcctcggcagaattctacgtgtttgttggg gtgatggtgttcctgtactgtatagcctctgtcattatatacctgttcttcaacaacttgtatgaggataataaatggcc tgtagtgggagtcgttaatctcaagtatttcacggatctggatgaatgtggagtgtttaaaagcataagtgattgtaagg cgtacggctgtactcaattccaatttccaaactttgcaagtctgaatgtatccatcatatttggattcctgaacatggtg gtatggatcgcaaacctctggttcttgtacaaggaaactccctggttcaaggccaagcaagaagccaacacttcttcccc gcagcagcagcaaacaccgaccgatccatccaggatatag |
|
Protein
| Protein ID | pfu_aug1.0_24562.1_04385.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24562.1_04385.t1 VLSIFAFATTTSVNTMLGFEAKNCPPNTNPIRESVQVAYPFDLEHESYTTPLCRLDNSTIVNSALLQGSKSSAEFYVFVG VMVFLYCIASVIIYLFFNNLYEDNKWPVVGVVNLKYFTDLDECGVFKSISDCKAYGCTQFQFPNFASLNVSIIFGFLNMV VWIANLWFLYKETPWFKAKQEANTSSPQQQQTPTDPSRI |
|