Gene
| Gene Model ID | pfu_aug1.0_24516.1_33441 |
|---|---|
| Locus | scaffold24516.1 : 17 ... 4226 : + |
| To GenomeBrowser | scaffold24516.1:17..4226 |
| Genes list of scaffold | scaffold24516.1 |
| Synonym | pfu_aug2.0_97.1_23449 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24516.1_33441.t1 | 1 | 1 | Ion_trans | 14 | 197 | 2.1e-14 | 53.2 | 5.3e-18 | 3.9e-14 | 52.3 |
| pfu_aug1.0_24516.1_33441.t1 | 2 | 1 | Ion_trans_2 | 51 | 51 | 7.3e-11 | 41.6 | 0.82 | 6100.0 | -3.0 |
| pfu_aug1.0_24516.1_33441.t1 | 2 | 2 | Ion_trans_2 | 126 | 197 | 7.3e-11 | 41.6 | 1.2e-14 | 9.1e-11 | 41.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24516.1_33441.t1 | gi|4519932|dbj|BAA75810.1| | Kv2 channel alpha-subunit [Halocynthia roretzi] | 3.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_24516.1_33441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24516.1_33441.t1 atgtacttgacgacgagacagcacagagctttagcaaccttggactgtatctctaataccgtcttagcaattgactacgt tcttgtaatttactgcagcccaaacagagttaaagccatgaaaagttggtacaacatcgttgatctgttggtccttctct tcgtttatgccttcaacattttggatcagacagataatacaatacttatggatcaaagccagttggtagtattggcaaca ttcatcgcagcaatatacagttttcgtatcctccgagtacttcgtttgatgaatcatacgacaggaatgattgccttata catgacgttcctttcaaactgtcatgtcttgttttatttcttcactgcattcgtctctgttagcctattctctgccacag tgttataccatgctgagctatggcagtcggactcttttaacaacatctaccagtctatttggtgggcggtggttacactc agcacggtaggatatggtgatatggtacctcagtcagtcttcggtcagattttagctgctgtcgttataatctatggctt attgataatagcaattccgtttgttatcatcactggcaactatggcagttattattcattctacgaattcatcaaagaac atgacaaggaggaagagggcaagaaagcaattgacaatgaaaatggtaattcataa |
|
Protein
| Protein ID | pfu_aug1.0_24516.1_33441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24516.1_33441.t1 MYLTTRQHRALATLDCISNTVLAIDYVLVIYCSPNRVKAMKSWYNIVDLLVLLFVYAFNILDQTDNTILMDQSQLVVLAT FIAAIYSFRILRVLRLMNHTTGMIALYMTFLSNCHVLFYFFTAFVSVSLFSATVLYHAELWQSDSFNNIYQSIWWAVVTL STVGYGDMVPQSVFGQILAAVVIIYGLLIIAIPFVIITGNYGSYYSFYEFIKEHDKEEEGKKAIDNENGNS |
|