Gene
| Gene Model ID | pfu_aug1.0_24136.1_26144 |
|---|---|
| Locus | scaffold24136.1 : 1 ... 9065 : - |
| To GenomeBrowser | scaffold24136.1:1..9065 |
| Genes list of scaffold | scaffold24136.1 |
| Synonym | pfu_aug2.0_350.1_00644 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24136.1_26144.t1 | 1 | 1 | Lyase_1 | 8 | 142 | 2.6e-11 | 43.2 | 4.3e-15 | 3.2e-11 | 42.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24136.1_26144.t1 | gi|348511301|ref|XP_003443183.1| | PREDICTED: adenylosuccinate lyase-like isoform X1 [Oreochromis niloticus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_24136.1_26144.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24136.1_26144.t1 atggggaaacgggcctgtatctggatccaagaccttgtgatggatctacgcaatttggagacagctcgggaaaacctgcg tttccgtggcgtgaagggtaccaccggcacacaggctagcttcttacagctgtttgaaggggacgaggaaaaggttgaga tgttagacagtctagtgacagaaatggctgggttcaaagagaacttcatcatttgcggccagacgtacagtaggaaagtt gatgttgactgtctgaatgtattggcgagtttgggggcttcagttcacaagatatgtacagatatacgcttacttgcaaa tttcaaagagctagaggaaccgtttgagaaggatcagattggttctagtgccatgccgtataagaggaaccccatgagga gcgaaaggtgttgttcgttggcgcggcatctcatgtgtctggtacaaaatccactgatgacggcttctgtacagtggatg gaaagaacactagatgacagtgcaaatagatccactgatgtgatggcttctgttcaatggatggagagaacgctggatga caacgcaaataggcgagtttgtttaccagaggcgttcctaactgccgatatagttctcagcactctacagaacatatcag aaggacttgtagtctaccctaaggtaacaaaattcttagagaaagaagtgcagccaaaactaaagaaatacgaagataac ctggactcaacagtgcaattagaactttga |
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Protein
| Protein ID | pfu_aug1.0_24136.1_26144.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24136.1_26144.t1 MGKRACIWIQDLVMDLRNLETARENLRFRGVKGTTGTQASFLQLFEGDEEKVEMLDSLVTEMAGFKENFIICGQTYSRKV DVDCLNVLASLGASVHKICTDIRLLANFKELEEPFEKDQIGSSAMPYKRNPMRSERCCSLARHLMCLVQNPLMTASVQWM ERTLDDSANRSTDVMASVQWMERTLDDNANRRVCLPEAFLTADIVLSTLQNISEGLVVYPKVTKFLEKEVQPKLKKYEDN LDSTVQLEL |
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