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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2390.1_51656
Locus scaffold2390.1 : 42336 ... 57426 : +
To GenomeBrowser scaffold2390.1:42336..57426
Genes list of scaffold scaffold2390.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2390.1_51656.t1 gi|340727012|ref|XP_003401845.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_2390.1_51656.t1
Definition-
>pfu_aug1.0_2390.1_51656.t1
atgcatatcatccgacagcgctcggacaaggtccaaatacagtactgccagaagcaaggggagaatatgaggggaaacaa
gcaggcctggatcaggcctcatacccaagtaccatatgcctgggatgagcccacactagaccacattataaccctcaaag
tccagagtggctcagacgcctcctacaacatggatcagctcggggaaggcccacaactctgttactccaatctcatctac
ctggccgcaacaaccacctttagcagaaatgttagtgaagatagacagaacttagtactggaagtagttgagagcaacta
tctcaaattcatgcctaaggagaagagtaagcgtagtcagttatggcggatgacgagtcagggaatgctggaacatgagg
gaagtatggctcccagggacccccgtagaggggcgtcatccacacgtagcctggtactggacatagacgatatagctcta
cagccagataaaatcgtccctctgacgctacggaagcctgacgagaggagacggtccacgcaaacctggatattcactca
gggtcatccacattctgcaaaagtttgtctcagtgaatatgaataccgtatgaccagaaattttcgcaattttatgcaaa
ttgtgaaacaagtaatatcaaagaaatatgatgactgggctatatatgatgaaagaacaaagaatgatgaagaaatggac
atccctgaactgtcaagtctagagttaaacatgagtctcaaaggaggatttggtatttcattgatcaacaaggtgccgca
agaattagtgtacatcacactaggaaatatacaggtggactacgtctcccgtcctaactctgtcactgtggacgtagtgg
tggggagtgtacaggtggataaccagttgtttgacacccagagacctgtcatgttgtttgtcacacccaccaacaagagg
gagggaccggacaacacccctgccttacatgtggctgcccaaaaagtgccaaatgccgagtggaatgcagaaatatacaa
gcatctgatagtttcaatgaggaagttgagcatccagcttgaggaacagttgctatggaaactgttacagtttgcaggaa
tgggaaaagaaaagaatatgcaagaacaagtaacttctgatgaggaaaatccaagaaaagccttagttgctgcaacatca
gtagagacaaagagatattacttcggtactctgaaaatcaacacaagccgagtcatactcagtatgcttaccgcctccaa
gctgtcctcagatctcagtgctatcaaacaggccatgagcgtgccactcgtaagatttgaagatgccaaggtggacttgg
ataatgtgaaagtgtcatttgatcagaaaataactcaataa

Protein
Protein IDpfu_aug1.0_2390.1_51656.t1
Definition-
>pfu_aug1.0_2390.1_51656.t1
MHIIRQRSDKVQIQYCQKQGENMRGNKQAWIRPHTQVPYAWDEPTLDHIITLKVQSGSDASYNMDQLGEGPQLCYSNLIY
LAATTTFSRNVSEDRQNLVLEVVESNYLKFMPKEKSKRSQLWRMTSQGMLEHEGSMAPRDPRRGASSTRSLVLDIDDIAL
QPDKIVPLTLRKPDERRRSTQTWIFTQGHPHSAKVCLSEYEYRMTRNFRNFMQIVKQVISKKYDDWAIYDERTKNDEEMD
IPELSSLELNMSLKGGFGISLINKVPQELVYITLGNIQVDYVSRPNSVTVDVVVGSVQVDNQLFDTQRPVMLFVTPTNKR
EGPDNTPALHVAAQKVPNAEWNAEIYKHLIVSMRKLSIQLEEQLLWKLLQFAGMGKEKNMQEQVTSDEENPRKALVAATS
VETKRYYFGTLKINTSRVILSMLTASKLSSDLSAIKQAMSVPLVRFEDAKVDLDNVKVSFDQKITQ

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