Gene
| Gene Model ID | pfu_aug1.0_2367.1_44351 |
|---|---|
| Locus | scaffold2367.1 : 57926 ... 68401 : + |
| To GenomeBrowser | scaffold2367.1:57926..68401 |
| Genes list of scaffold | scaffold2367.1 |
| Synonym | pfu_aug2.0_1.1_03362 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2367.1_44351.t1 | 1 | 1 | zf-C3HC4 | 20 | 59 | 8.3e-07 | 28.5 | 7.3e-10 | 8.3e-07 | 28.5 |
| pfu_aug1.0_2367.1_44351.t1 | 2 | 1 | zf-C3HC4_4 | 20 | 59 | 7.9e-06 | 25.6 | 7.0e-09 | 7.9e-06 | 25.6 |
| pfu_aug1.0_2367.1_44351.t1 | 2 | 2 | zf-C3HC4_4 | 53 | 68 | 7.9e-06 | 25.6 | 0.027 | 31.0 | 4.5 |
| pfu_aug1.0_2367.1_44351.t1 | 2 | 1 | zf-TRAF | 91 | 111 | 4.0e-08 | 33.5 | 0.28 | 320.0 | 1.8 |
| pfu_aug1.0_2367.1_44351.t1 | 2 | 2 | zf-TRAF | 111 | 159 | 4.0e-08 | 33.5 | 3.5e-11 | 4.0e-08 | 33.5 |
Transcript
| Transcript ID | pfu_aug1.0_2367.1_44351.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2367.1_44351.t1 atggaagtcgggtatccgacggagatatttccccagggattcgatgagaagctgatttgtaacagctgtaacaaagtgct gaaggaccccgttcagagttattgtggtcataggttctgtaaaccatgcatcaacagagaaatgagtaaaggccaacatg tacgctgtcagacatgtatccgagaaggagctgaagaagaggactacagcatgatcagcaaagatcacatatttcctgac aatgcactcagacgtgagatgttcagcatggaagcaacctgtctgaatcaaggatgtaattggtctggcaaattcagaca tttcgagaaacacgcaaacgaatgcaagttcaaaccagtgacatgccaacaatgtcatggattggttgaagcctcaagat acaaacatcaccttggaaatgactgtccaaaacgaccaatcaaatgtcagtactgcaaagaggatttttatgcagaaata tacgaggtagagcgtagcaggttcttgacacaccttgatcagaaatccgggttccatcttaacttcatcatggatcaact caaaattctgtcgcaagaaaccaatacaaaagtcggtcaattagctccaatgtcggaaatcttacaactcaaacagaacg tggagcaactccaagtaagattacaacaagtaggaggaccaatacctcccgggagtgaggacaacgcagtgatgcagcaa cgatgccgagctcttgaattgaaagtgagcacgtttgagggaatcgtcaccacgctgcatcgggaaattgagaggtgtct cacccatcttgatggcatagaaagggggaattctggtaactcgggaccagtggcacaaagagtagagcaactggaacgtg ctcttgcacagaaagacaaagaaaatatggaattgaaacagtacattgatgacaaattgtccgccacttacgatggagaa cacgtatggagaatagaaaactggtcaaagttacgtaaggatgctatgtcaggaatgaggaccagcatattctctgtacc cttttatacaagcagacatggatataaaatgtgtgttagtatacataaagtgatgctcttacgcatggactatttttcta cttctgaaaatcggacgttacttttgaatatatctagacggacagatgaacttttattccaaggtcgataa |
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Protein
| Protein ID | pfu_aug1.0_2367.1_44351.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2367.1_44351.t1 MEVGYPTEIFPQGFDEKLICNSCNKVLKDPVQSYCGHRFCKPCINREMSKGQHVRCQTCIREGAEEEDYSMISKDHIFPD NALRREMFSMEATCLNQGCNWSGKFRHFEKHANECKFKPVTCQQCHGLVEASRYKHHLGNDCPKRPIKCQYCKEDFYAEI YEVERSRFLTHLDQKSGFHLNFIMDQLKILSQETNTKVGQLAPMSEILQLKQNVEQLQVRLQQVGGPIPPGSEDNAVMQQ RCRALELKVSTFEGIVTTLHREIERCLTHLDGIERGNSGNSGPVAQRVEQLERALAQKDKENMELKQYIDDKLSATYDGE HVWRIENWSKLRKDAMSGMRTSIFSVPFYTSRHGYKMCVSIHKVMLLRMDYFSTSENRTLLLNISRRTDELLFQGR |
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