Gene
| Gene Model ID | pfu_aug1.0_2305.1_08287 |
|---|---|
| Locus | scaffold2305.1 : 83132 ... 113931 : - |
| To GenomeBrowser | scaffold2305.1:83132..113931 |
| Genes list of scaffold | scaffold2305.1 |
| Synonym | pfu_aug2.0_385.1_17363 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2305.1_08287.t1 | 4 | 1 | Ank_2 | 293 | 392 | 3.2e-35 | 120.3 | 6.1e-20 | 1.8e-16 | 60.2 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 1 | Ank_4 | 293 | 316 | 1.3e-25 | 89.3 | 0.6 | 1800.0 | -0.4 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 1 | Ank_3 | 331 | 357 | 7.2e-25 | 84.5 | 7.5e-09 | 2.2e-05 | 24.2 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 1 | Ank | 332 | 360 | 1.0e-29 | 100.7 | 1.1e-08 | 3.4e-05 | 23.4 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 2 | Ank_4 | 332 | 381 | 1.3e-25 | 89.3 | 1.5e-13 | 4.6e-10 | 39.7 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 1 | Ank_5 | 332 | 369 | 4.3e-25 | 87.1 | 8.2e-09 | 2.4e-05 | 24.3 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 2 | Ank_5 | 348 | 399 | 4.3e-25 | 87.1 | 7.8e-11 | 2.3e-07 | 30.8 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 2 | Ank | 361 | 392 | 1.0e-29 | 100.7 | 6.0e-07 | 0.0018 | 18.0 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 2 | Ank_3 | 361 | 390 | 7.2e-25 | 84.5 | 2.4e-07 | 0.00072 | 19.5 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 3 | Ank_4 | 376 | 414 | 1.3e-25 | 89.3 | 0.0033 | 9.8 | 6.8 |
| pfu_aug1.0_2305.1_08287.t1 | 4 | 2 | Ank_2 | 402 | 487 | 3.2e-35 | 120.3 | 5.9e-13 | 1.7e-09 | 37.8 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 3 | Ank_5 | 417 | 470 | 4.3e-25 | 87.1 | 2.3e-08 | 6.8e-05 | 22.9 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 3 | Ank | 429 | 457 | 1.0e-29 | 100.7 | 0.0045 | 13.0 | 5.7 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 3 | Ank_3 | 429 | 453 | 7.2e-25 | 84.5 | 0.0046 | 14.0 | 6.3 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 4 | Ank_4 | 431 | 483 | 1.3e-25 | 89.3 | 3.4e-08 | 0.0001 | 22.7 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 4 | Ank_5 | 457 | 501 | 4.3e-25 | 87.1 | 6.5e-07 | 0.0019 | 18.3 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 4 | Ank | 462 | 485 | 1.0e-29 | 100.7 | 1.9e-10 | 5.5e-07 | 29.0 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 4 | Ank_3 | 462 | 485 | 7.2e-25 | 84.5 | 7.9e-06 | 0.024 | 14.8 |
| pfu_aug1.0_2305.1_08287.t1 | 4 | 3 | Ank_2 | 494 | 540 | 3.2e-35 | 120.3 | 5.5e-06 | 0.016 | 15.5 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 5 | Ank_5 | 497 | 537 | 4.3e-25 | 87.1 | 2.2e-06 | 0.0067 | 16.6 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 5 | Ank_4 | 499 | 545 | 1.3e-25 | 89.3 | 0.00052 | 1.5 | 9.3 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 5 | Ank | 500 | 525 | 1.0e-29 | 100.7 | 0.00014 | 0.43 | 10.4 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 5 | Ank_3 | 500 | 524 | 7.2e-25 | 84.5 | 0.0035 | 10.0 | 6.6 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 6 | Ank | 530 | 546 | 1.0e-29 | 100.7 | 0.016 | 46.0 | 4.0 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 6 | Ank_3 | 530 | 540 | 7.2e-25 | 84.5 | 0.18 | 520.0 | 1.4 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 6 | Ank_4 | 562 | 594 | 1.3e-25 | 89.3 | 0.0028 | 8.3 | 7.0 |
| pfu_aug1.0_2305.1_08287.t1 | 4 | 4 | Ank_2 | 570 | 608 | 3.2e-35 | 120.3 | 0.11 | 320.0 | 1.7 |
| pfu_aug1.0_2305.1_08287.t1 | 6 | 6 | Ank_5 | 579 | 593 | 4.3e-25 | 87.1 | 0.048 | 140.0 | 2.9 |
| pfu_aug1.0_2305.1_08287.t1 | 7 | 7 | Ank_3 | 586 | 599 | 7.2e-25 | 84.5 | 0.38 | 1100.0 | 0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2305.1_08287.t1 | gi|190337136|gb|AAI63627.1| | Mib2 protein [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2305.1_08287.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2305.1_08287.t1 gttgtgggtgagattgggacggtccagcgctatttaggtggagacaaagtatccgtacactatacggtatcaggtagagc ttggactatttacaaaggagcatgtacaaaggtttctgtaatagagaacggagatgtggtgaaagttgtgagtgacgtga agtttttccatatgatacagagtggaggtcacgggggctatagtgacgacatgaagaagggcataagatatgctaatttg atttcagagctgccggagcactccagacgaggtccgagtcagcgtgagaaggaggagccatccgtggacgcagaacaaaa tgtagacgacggacgtataaagaaagacgaccaagtcaaaattggtgtcgatttagatattttacaatccatccagaaag aagcaaatgcctggagcgacagaattgttgaatgcataggaaaaacaggaaaagtattgtttatagagggacaacttgcc acagttgattttgatggccctaaatggcgacttcatgaaattgcccttgtcaaggtaacagagtttaagattgaacaagt agttcggttaatgagcagtgcagacgatgttaggaggatgcagaacggacatggaccttgggaagatgacatgaaaaagt acttaggaaagaagggtaaagtgatcgaggtggattctgacggagacgtacacgtaacgtttgacaacatggtctggaag tttaacccggaatgcttagagcccgccactggggatgtggacacgtttgacgatcctgtgctcgaaaggccaaggtcacc tagccctgtacctgtacaaagactgccacctgttagggaggcgtgggaggacaatgtgaatggagagttcgtaaaggcgc tgaaggaaggaaatgataaaatgctgaggaaaatcttagacaaatatccacatttgataaatgagatagatcaagaggat gcacatgtcagccagaaaactgatcagggacctccattgttaatggccgttagaagtaagaggatagaagtggtcaaaat cttgctggagaagggagctgataaaaatgccgcgaacaacaacggtcaaacggctgtacatattgcggtacagactaaaa atgctgatatgttacgtgtcctgaaaaactttgggtgtgacttcaacaagaaggatcaactcggagataacccagtaacg gatgctattactggaggagatcggcagatcatggaacttatactgaggcatcctgggattgatttgaagttcgaaaatag actaggattcagacccatccatacggccgctagaaaaggcgagaaatttgcagtagaggagattctgagccaacaccctg gtgagctaaacaaacctaaggaggatggctttactccccttcacttggccgcatgtatgaaccacaagggtatcgtccaa gttctactcagtaagtcggaaatagagacggagacaagaacaaaggaagagaagttatctcccttgctgatcgcctgtct gtacggcagtgatgaggttatagaccctctacttagaggaagagtagatttagcagtagaagacagtgatgggaacaacg ctctacatttatgtatgagaggcaagccttccgtcatggaattctctaggattcagaacacggatcctgtgaagccagac gttgctgaggtgaagaagcgtgagaagattttatcagctctgtacgagcatgtgccgtatacacggaacaaacagggcaa ataccccctggacatcgcttgcgaccagtctctgaaagataggctgtatcaatatctgagagaaaaagggtaa |
|
Protein
| Protein ID | pfu_aug1.0_2305.1_08287.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2305.1_08287.t1 VVGEIGTVQRYLGGDKVSVHYTVSGRAWTIYKGACTKVSVIENGDVVKVVSDVKFFHMIQSGGHGGYSDDMKKGIRYANL ISELPEHSRRGPSQREKEEPSVDAEQNVDDGRIKKDDQVKIGVDLDILQSIQKEANAWSDRIVECIGKTGKVLFIEGQLA TVDFDGPKWRLHEIALVKVTEFKIEQVVRLMSSADDVRRMQNGHGPWEDDMKKYLGKKGKVIEVDSDGDVHVTFDNMVWK FNPECLEPATGDVDTFDDPVLERPRSPSPVPVQRLPPVREAWEDNVNGEFVKALKEGNDKMLRKILDKYPHLINEIDQED AHVSQKTDQGPPLLMAVRSKRIEVVKILLEKGADKNAANNNGQTAVHIAVQTKNADMLRVLKNFGCDFNKKDQLGDNPVT DAITGGDRQIMELILRHPGIDLKFENRLGFRPIHTAARKGEKFAVEEILSQHPGELNKPKEDGFTPLHLAACMNHKGIVQ VLLSKSEIETETRTKEEKLSPLLIACLYGSDEVIDPLLRGRVDLAVEDSDGNNALHLCMRGKPSVMEFSRIQNTDPVKPD VAEVKKREKILSALYEHVPYTRNKQGKYPLDIACDQSLKDRLYQYLREKG |
|