Gene
| Gene Model ID | pfu_aug1.0_23047.1_54866 |
|---|---|
| Locus | scaffold23047.1 : 19262 ... 23645 : - |
| To GenomeBrowser | scaffold23047.1:19262..23645 |
| Genes list of scaffold | scaffold23047.1 |
| Synonym | pfu_aug2.0_1.1_03348 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23047.1_54866.t1 | 1 | 1 | bZIP_1 | 1 | 54 | 1.6e-09 | 37.5 | 3.3e-12 | 1.6e-09 | 37.5 |
| pfu_aug1.0_23047.1_54866.t1 | 2 | 1 | bZIP_2 | 3 | 45 | 2.6e-07 | 30.3 | 5.7e-10 | 2.7e-07 | 30.2 |
| pfu_aug1.0_23047.1_54866.t1 | 2 | 2 | bZIP_2 | 37 | 61 | 2.6e-07 | 30.3 | 0.004 | 1.9 | 8.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23047.1_54866.t1 | gi|291223951|ref|XP_002731971.1| | PREDICTED: cyclic AMP-dependent transcription factor ATF-6 alpha-like [Saccoglossus kowalevskii] | 3.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_23047.1_54866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23047.1_54866.t1 atgatcaagaacagagaatcagcaagtctgtccaggaaaagaaagaaagagtatttaactcagttggagcagcaacttca agaatctacaacacaaaatcaaagactcaaggaggagaacgagtcactgaagagaaaactgtcgtacattcagaatgaga atgatgagttgaagaagacagtgtccgtctctccgtccaaacgtgtatgtctgatggcagtattccttatcttcagcttg aatgttgtacagttcagtgactacctattgacagataagatcaaaagatctcattcaaactcagaaataccggctcacaa gagcagacaactcttgtctgtactaaacgatgaggacagttattctgtagggaaattttatgcctccagcaagtatgcag aaattcatacaagaaaaccctga |
|
Protein
| Protein ID | pfu_aug1.0_23047.1_54866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23047.1_54866.t1 MIKNRESASLSRKRKKEYLTQLEQQLQESTTQNQRLKEENESLKRKLSYIQNENDELKKTVSVSPSKRVCLMAVFLIFSL NVVQFSDYLLTDKIKRSHSNSEIPAHKSRQLLSVLNDEDSYSVGKFYASSKYAEIHTRKP |
|