Gene
| Gene Model ID | pfu_aug1.0_20968.1_54723 |
|---|---|
| Locus | scaffold20968.1 : 9606 ... 13667 : + |
| To GenomeBrowser | scaffold20968.1:9606..13667 |
| Genes list of scaffold | scaffold20968.1 |
| Synonym | pfu_aug2.0_252.1_07237 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20968.1_54723.t1 | 1 | 1 | Neur_chan_LBD | 27 | 228 | 3.79752e-43 | 147.1 | 0.0 | 4.59626e-43 | 146.8 |
| pfu_aug1.0_20968.1_54723.t1 | 2 | 1 | Neur_chan_memb | 49 | 62 | 4.1e-06 | 26.8 | 0.49 | 3600.0 | -2.5 |
| pfu_aug1.0_20968.1_54723.t1 | 2 | 2 | Neur_chan_memb | 236 | 313 | 4.1e-06 | 26.8 | 5.6e-10 | 4.1e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20968.1_54723.t1 | gi|348525922|ref|XP_003450470.1| | 2.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_20968.1_54723.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20968.1_54723.t1 atgtattcgaatctgtttgtgactgcttttatcatttcattgttttgtttctgtgaagggacaaacttctctacagtgga gaaacttcgtagtgatctattaacaggctatgaaccaagtttgagacctggaactgaccagtccattcctcttaatattt ctgttggtctcagtatgaccttactacgagagtttgacgaagttaccagctctttttcgatgatcggatatttgaacgtc aaatggattgaccacagattacaatggatatcatcaaattacgaaggactgacgaaaatggtacttttacagagtgacgt atgggtaccgccaatactgttagtgaatccgtcacattcattcgacctgcttggattttctacagacagggtccaagtga tgcaggacggaagtgtcaattggcttccgccagatctattccaatttatatgcgaagcggacgtgacgcattttcctttt gatgaacaaacgtgcgcaatggctttacgcgcatgcggttatacgatttccgacttgaatatgcagcacgccagcgatag ggtatcggaagcatcgaccctcacggagaatggaatatgggagataatcgaaacgtcttcaagttcctatgttgatatgg atgcacaggttatgagattttctatcattatccgcaggagacccggattttacatcgtgaatctcgtcctcccgattatg gctatgttagttctacagcttttcgtttttctccttcctgttgagtctggagagcgcatcggatactctatcacaatact tttggctatttctgtcttcttttctattattaccgattttatccccgaaaccgtgattccaaacctaccgatcatttgtt acaaactgatcgtagacttcttcctttgtactttgataacgattctcgcaattatgagcctacg |
|
Protein
| Protein ID | pfu_aug1.0_20968.1_54723.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20968.1_54723.t1 MYSNLFVTAFIISLFCFCEGTNFSTVEKLRSDLLTGYEPSLRPGTDQSIPLNISVGLSMTLLREFDEVTSSFSMIGYLNV KWIDHRLQWISSNYEGLTKMVLLQSDVWVPPILLVNPSHSFDLLGFSTDRVQVMQDGSVNWLPPDLFQFICEADVTHFPF DEQTCAMALRACGYTISDLNMQHASDRVSEASTLTENGIWEIIETSSSSYVDMDAQVMRFSIIIRRRPGFYIVNLVLPIM AMLVLQLFVFLLPVESGERIGYSITILLAISVFFSIITDFIPETVIPNLPIICYKLIVDFFLCTLITILAIMSL |
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