Gene
| Gene Model ID | pfu_aug1.0_20218.1_54654 |
|---|---|
| Locus | scaffold20218.1 : 976 ... 15355 : + |
| To GenomeBrowser | scaffold20218.1:976..15355 |
| Genes list of scaffold | scaffold20218.1 |
| Synonym | pfu_aug2.0_87.1_23427 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20218.1_54654.t1 | gi|260782528|ref|XP_002586338.1| | hypothetical protein BRAFLDRAFT_132233 [Branchiostoma floridae] | 1.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20218.1_54654.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20218.1_54654.t1 atggcttcgcctgctatacgagttagccagtacgaggaagctaagaaggaccaggatgaagatgatgatttggacaagga actagagtcctacatcgcagagagtgacaagaaaaaagaggaggatacaaaggaggagaaggtgaaggacaacgatagta taagtagcgagagttccaaaagctctgactccagtgataaggattccaagaaagataagcaggagactaaaggggatgat acagaaaaggccaaatcagcagacacagagcaaaaagaagcagacgtcacagaaaagaaagaggcagaagttgcacaaca agaagacgtagcagacgacaccacaaaaggtcaaagcagcaaaaaaggtgatgccgatgacgtagcgaaagacgagaaag agaatgtgagtagcgtagggaaggagagacaaaaatcaccagatgacgaagattctgaacctgatgaatatacactgaca gaggatcagcagagagcactcagggaaatggaggaattaaggcgggagatgggacttccagaggaggatccccctgaata tgatgtaagggaaagattgaaaagtttgaatgaggaacttgccaatgatcctactcctgtggagaaacatacatcaaaag ttggctttaaagacaatctggtggaccttgtagctccaccccctgattatcctgacgaagaaacgcctagaaatcaggaa aatactggaggtacttcagactccttttcagcaaaatctcaggacactgataaagtggaaaatgacaaagttgttgagaa tgataacgaggaggacaaaaaagtgtcggaaaatgtgaaatctgacaatagcaatgacaaaaagaaaggaagtgatcaaa aagttttaatagaaaaggatggtaaatttgaattggtgagctctgacgatgtccgtgctaaagatttaggacttccgttg ctggacgaggaaaatacgaacaacaatagtaataacagtgcttcaaattctcaggaggatttaaatcgagtgccggcacc gccatcccaccccaggcctagcacggctaacggcaatgctaggaggaacgtgagagtttcgtcatcaaggcagcgtgctt cgtcggcaggtcctcacaggggatcggctttagatcaggattttaattataattcaccatatgcaatgtccaagcaagac aaagaattgctagaaaagcagaagaaatataaagaggaacaaatgaaggagaaacaaaagcaggaaaagagagagaaaga agatagagaaagggaaaataatgacgcgtttcaatattggttaaaacaaaaacgagaagaaatgagggagaaaagaaaac gagacgaagaagaaaggaaaagaaatggagctagtgatagaagaaaacacggcagtgatgacagcttagtaacgggatca tatcattcagacagtgaccagagcaatggcttggaagcctatgaccaactgttctataatgataatgatttcagatttga acccccccccccctcttccatcataaaacctgatttgaactcagatggttacgtcaaaagaatacagaagccagaaaagc acgaatggtggaacgacagagggcaaaaattcatcggttag |
|
Protein
| Protein ID | pfu_aug1.0_20218.1_54654.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20218.1_54654.t1 MASPAIRVSQYEEAKKDQDEDDDLDKELESYIAESDKKKEEDTKEEKVKDNDSISSESSKSSDSSDKDSKKDKQETKGDD TEKAKSADTEQKEADVTEKKEAEVAQQEDVADDTTKGQSSKKGDADDVAKDEKENVSSVGKERQKSPDDEDSEPDEYTLT EDQQRALREMEELRREMGLPEEDPPEYDVRERLKSLNEELANDPTPVEKHTSKVGFKDNLVDLVAPPPDYPDEETPRNQE NTGGTSDSFSAKSQDTDKVENDKVVENDNEEDKKVSENVKSDNSNDKKKGSDQKVLIEKDGKFELVSSDDVRAKDLGLPL LDEENTNNNSNNSASNSQEDLNRVPAPPSHPRPSTANGNARRNVRVSSSRQRASSAGPHRGSALDQDFNYNSPYAMSKQD KELLEKQKKYKEEQMKEKQKQEKREKEDRERENNDAFQYWLKQKREEMREKRKRDEEERKRNGASDRRKHGSDDSLVTGS YHSDSDQSNGLEAYDQLFYNDNDFRFEPPPPSSIIKPDLNSDGYVKRIQKPEKHEWWNDRGQKFIG |
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