Gene
| Gene Model ID | pfu_aug1.0_20161.1_61977 |
|---|---|
| Locus | scaffold20161.1 : 1 ... 7285 : - |
| To GenomeBrowser | scaffold20161.1:1..7285 |
| Genes list of scaffold | scaffold20161.1 |
| Synonym | pfu_aug2.0_378.1_27321 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20161.1_61977.t1 | 1 | 1 | BTB | 27 | 128 | 3.3e-25 | 88.2 | 8.8e-29 | 3.3e-25 | 88.2 |
| pfu_aug1.0_20161.1_61977.t1 | 2 | 1 | BACK | 104 | 131 | 7.0e-08 | 32.2 | 0.012 | 45.0 | 3.9 |
| pfu_aug1.0_20161.1_61977.t1 | 2 | 2 | BACK | 140 | 241 | 7.0e-08 | 32.2 | 1.1e-09 | 3.9e-06 | 26.6 |
| pfu_aug1.0_20161.1_61977.t1 | 1 | 1 | PHR | 286 | 429 | 5.4e-19 | 68.8 | 3.2e-22 | 1.2e-18 | 67.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20161.1_61977.t1 | gi|156396866|ref|XP_001637613.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_20161.1_61977.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20161.1_61977.t1 atggaatctgattcgtcgcagtcatcaatcaatcattggcaaagtgggcggtccctcccacaatgtctgcaatatatcct ggagaatgaacatatgtgtgatgtaacattccttgtgggggaggagcatgaagaaatccacgcccatagattcatcctga ccaatcggagctcagtattccaagttatgctgcagggcatgctggcagaaagaggtgaaattaagatacctgatgttgat aaagatactttcagcgcatttcttagatatctttatacagacactgcagacttcacaccagagaatgccttaggacttct atatactgcacacaaatactgtgtagacaatctagcacaactggcctcgaaatacctccaagcacatgtgacttcagaca acgcctgtgccgcgctcattgcctccttatgtttctcggacagtgaactgcaagaagcatctttaaaagtgataatagat gaaacggaggaatctatcagtgatgacagtttcttgtcactcagtctagatgcaataaaaattatcacggaacagaagga tcttagcattccagaggagaccctctgtaaaaggctgttagaatgggcagaggcagagtgtcggaggcaatgtattaagt taaactggcaaaataagcgacaagtacttggggacgtggtgtatgatataagatttcccctaatggaccaagattatttc tcgatgtctttcggtgagaatgaatttctgacatcagaagagaaagttgaagttttgctgcactatgtttccccaaaaaa gaaatcaaggaaaattttcaattatgaaacgagaaaaactgaagtgtacaaagtcaaccgtttcactcatactacgggag ggtacatacttgatggcgaggcagacgctattgactttcagacatcccataattcaacactgcatggtctgcttctattc ggcagtttttataaaccgacactttatactcttggtttagatataataaactttcaaggtgatgttctggtccatatttc taaaacctttgactctgatcctggtacccccatacatactatagaactggaaccaccccttgaaataaaaggaaggcgtg tttatactataaagatgacattaaccggagatagctcaaggcggggagagtttggcactcataaagtgttttatgacaaa ggaaaatgtcgaagtgtcacctttttcccatctgcgttgtcgaaaaatgggactaatgagaagaaaggtcaaattccagg actcttactgacctga |
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Protein
| Protein ID | pfu_aug1.0_20161.1_61977.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20161.1_61977.t1 MESDSSQSSINHWQSGRSLPQCLQYILENEHMCDVTFLVGEEHEEIHAHRFILTNRSSVFQVMLQGMLAERGEIKIPDVD KDTFSAFLRYLYTDTADFTPENALGLLYTAHKYCVDNLAQLASKYLQAHVTSDNACAALIASLCFSDSELQEASLKVIID ETEESISDDSFLSLSLDAIKIITEQKDLSIPEETLCKRLLEWAEAECRRQCIKLNWQNKRQVLGDVVYDIRFPLMDQDYF SMSFGENEFLTSEEKVEVLLHYVSPKKKSRKIFNYETRKTEVYKVNRFTHTTGGYILDGEADAIDFQTSHNSTLHGLLLF GSFYKPTLYTLGLDIINFQGDVLVHISKTFDSDPGTPIHTIELEPPLEIKGRRVYTIKMTLTGDSSRRGEFGTHKVFYDK GKCRSVTFFPSALSKNGTNEKKGQIPGLLLT |
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