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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19682.1_18663
Locus scaffold19682.1 : 2866 ... 10085 : +
To GenomeBrowser scaffold19682.1:2866..10085
Genes list of scaffold scaffold19682.1
Synonym pfu_aug2.0_206.1_20426

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_19682.1_18663.t1 1 1 Abhydrolase_5 24 192 1.6e-25 89.5 1.5e-28 2.4e-25 88.9
pfu_aug1.0_19682.1_18663.t1 1 1 Abhydrolase_6 25 183 1.5e-13 51.1 2.0e-14 3.3e-11 43.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19682.1_18663.t1 gi|241616513|ref|XP_002407970.1| alpha/beta hydrolase, putative [Ixodes scapularis] 0.0

Transcript
Transcript IDpfu_aug1.0_19682.1_18663.t1
Definition-
>pfu_aug1.0_19682.1_18663.t1
atgacccgtacatccaagggaaatcgtatcagctgcatgtttgtacgttgttcaccaagtgcaaagtacacattattgtt
cagtcatgggaatgctgtagatcttggacagatgagcagcttctacattggattaggatctcgtataaactgtaatattt
ttagctatgattattcaggatatggcaacagttcagggaaaccatcggagaagaatctctatgcagatatagatgcagcc
tggcaagctttacggactcgatacggaatttgtcctcaaaatgtcatattatatggacaaagtataggaacagttcctac
tgtagatttggcttcaagatacgaggttggcgcagtagtccttcattcaccactgatgtcagggatgcgggtagcatttc
cagagacaaagcgaacctggttctttgatgcatttcctagtattgacaaagtgcccaagattacttcaccagtgttagtc
attcatgggactgaggatgaagtcattgacttttctcatggacttgcaatttatgagaaatgcccacgagctgtagagcc
tctatgggttgaagctaataccaatggtgaggacacactagattcagcctgcgggtctcaatctgccaaggaatatgaac
catttgacttgcatgaaaagcaaatacggcaatctagaaggagaattttgaagaagaatctccttaaaaaggaacccagg
aaaaggagtcatgacgataccaaatgtcacgaagcagctagtccagatgtgatgcttacacaaactgagcttattgatac
taacaatggctttatcattcaaacagagtttaaagattcatgtgatctgagtgtgcaaacttcccccagtataaacagct
ctataaacctatcaaatgccgatatggagggacctgttgaagggaatatacagaaagatgaaggaagtttttctgaattc
tctgagggaaaatcacagtatgaaacagcttctgataatgagggggatatggaaaagtgttcggttaccatggtaacaga
atctgctacagaagatacttattctatcaatttaagcactcacgacgctcatgacaatgaagttcagcagaattcatcag
aattagagaatgatgtaggtagagacgattatgtacctgatccgtcggtagattcacactctgatatcacccatagctca
ccggatattcagagggaggactcattcattttagagtctactgatttatga

Protein
Protein IDpfu_aug1.0_19682.1_18663.t1
Definition-
>pfu_aug1.0_19682.1_18663.t1
MTRTSKGNRISCMFVRCSPSAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSYDYSGYGNSSGKPSEKNLYADIDAA
WQALRTRYGICPQNVILYGQSIGTVPTVDLASRYEVGAVVLHSPLMSGMRVAFPETKRTWFFDAFPSIDKVPKITSPVLV
IHGTEDEVIDFSHGLAIYEKCPRAVEPLWVEANTNGEDTLDSACGSQSAKEYEPFDLHEKQIRQSRRRILKKNLLKKEPR
KRSHDDTKCHEAASPDVMLTQTELIDTNNGFIIQTEFKDSCDLSVQTSPSINSSINLSNADMEGPVEGNIQKDEGSFSEF
SEGKSQYETASDNEGDMEKCSVTMVTESATEDTYSINLSTHDAHDNEVQQNSSELENDVGRDDYVPDPSVDSHSDITHSS
PDIQREDSFILESTDL

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