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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19060.1_54540
Locus scaffold19060.1 : 1 ... 5860 : +
To GenomeBrowser scaffold19060.1:1..5860
Genes list of scaffold scaffold19060.1
Synonym pfu_aug2.0_129.1_30258

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_19060.1_54540.t1 1 1 Hist_deacetyl 1 183 0.0 228.1 0.0 0.0 227.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19060.1_54540.t1 gi|157129659|ref|XP_001655442.1| AAEL002528-PA [Aedes aegypti] 0.0

Transcript
Transcript IDpfu_aug1.0_19060.1_54540.t1
Definition-
>pfu_aug1.0_19060.1_54540.t1
gcggcaggctgtgtcacagaacttgccactagggtagcaaaccgagaactgaagaacggctttgctgtggtacggccacc
aggtcaccatgcagagtcaaatcaggctatgggtttctgctatttcaacaacatcgctattgcggccaagcagcttcggg
agaaaagtaatgccgagaaggttctaatagtggactgggatgttcaccatgggaattcaactcagcaaatattttactct
gatccatctgtgttgtacatttccatccatcgtcatgacaacggtaactttttcccggggaccggatccccatcggagtg
tggtgagggggagggagccggatttaacgttaatattgccttcggagggagcttggaaccgccactcggtgacgcagaat
atcttgcagcatttagaaccctagtcatgccaatagccaaggacttcaaaccggacattgtgctcgtgtcagcgggattt
gacgcagcggtaggccatccggcacccctcggtggttatctagtctccccagcattggttctatggagcaagaaacagaa
cctgtag

Protein
Protein IDpfu_aug1.0_19060.1_54540.t1
Definition-
>pfu_aug1.0_19060.1_54540.t1
AAGCVTELATRVANRELKNGFAVVRPPGHHAESNQAMGFCYFNNIAIAAKQLREKSNAEKVLIVDWDVHHGNSTQQIFYS
DPSVLYISIHRHDNGNFFPGTGSPSECGEGEGAGFNVNIAFGGSLEPPLGDAEYLAAFRTLVMPIAKDFKPDIVLVSAGF
DAAVGHPAPLGGYLVSPALVLWSKKQNL

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