Gene
| Gene Model ID | pfu_aug1.0_1892.1_66137 |
|---|---|
| Locus | scaffold1892.1 : 30386 ... 32564 : + |
| To GenomeBrowser | scaffold1892.1:30386..32564 |
| Genes list of scaffold | scaffold1892.1 |
| Synonym | pfu_aug2.0_97.1_23452 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1892.1_66137.t1 | 3 | 1 | Homez | 111 | 125 | 8.6e-06 | 24.7 | 0.6 | 1800.0 | -2.0 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 1 | Homeobox_KN | 166 | 183 | 9.1e-23 | 79.6 | 0.55 | 1600.0 | -1.2 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 1 | Homeobox | 172 | 183 | 6.8e-21 | 73.6 | 0.29 | 860.0 | -0.4 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 2 | Homeobox | 358 | 409 | 6.8e-21 | 73.6 | 5.1e-11 | 1.5e-07 | 30.9 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 2 | Homez | 367 | 407 | 8.6e-06 | 24.7 | 6.1e-06 | 0.018 | 14.0 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 2 | Homeobox_KN | 370 | 409 | 9.1e-23 | 79.6 | 1.5e-12 | 4.5e-09 | 35.8 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 3 | Homeobox | 444 | 496 | 6.8e-21 | 73.6 | 1.3e-13 | 3.8e-10 | 39.2 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 3 | Homeobox_KN | 456 | 495 | 9.1e-23 | 79.6 | 8.1e-15 | 2.4e-11 | 43.1 |
| pfu_aug1.0_1892.1_66137.t1 | 3 | 3 | Homez | 472 | 496 | 8.6e-06 | 24.7 | 0.00069 | 2.0 | 7.5 |
Transcript
| Transcript ID | pfu_aug1.0_1892.1_66137.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1892.1_66137.t1 atgacgaccagcctccagaccagttcctcaacaacccattacgcatcctacctacaagccactccagcaaaccaaatgcc aaaccatccaatgggaagcagcctaacaacaagcccagagatcagaagtcctacatccaccaatcacatcaacagttact atagcagaataccagcctacccagcaactaccagtctacaacgcctccaaaacaaccctatgtttcaggatctacaggac ttgctgacagaggaatgcttacacatgcaggttcccaccaaccttgttaatacagcctgggctgaccataccacacccac cttaccaaccccaggacaggatatgttctccaaacacatcagactgcaagaaactcttttgcaacttcgatctgatgaaa agttccgcagcagtggtttggacattgagtctaagtacagtgcagaagtaggacagatagaggtttccagataccaagcc cttcatgcagccggtactaactactcagagagacaaacagtcaacaaccactttgacaacaaacgaatttcattgattca gagttgccagtcacaaattgatgcagctttaagtagatgtactaaccagtcacaaattgatgcagctttaagtagatgta ctacagatatcctagaaattccaacctacccaacacaagcagccagctccttccactcaacagagactggatgcagaagc agtgcctttcagccatacagtaatgtttcagaaagaagccagccaagaactcctgaagatgttgcagtgccagatcctaa tgatgtcaccgtaagcagcgaagaattaactcaaccaggattttcagactctggatgcttcagtgatgacagtgcctcaa agaccttcaactccaccatagatattctacagcaagccaaatccaaacagcagatccaacctatgatgatgttgtgccct ccaataccaactcaaggaagagaaaaacctcctgtgacnggtgatgatgaggaagacactcaggaatccaagcgacagtg cccagcagttaggatgaggggacgcagtaagcaactgacagatgagcagactgctatcctcagtgcctggtacagtcaac acatcaactacccatatccagctgaagaagatgtcgccagcttgacagaagccactggtctgaatgataagcaggtgaag aaatggatgtccaacaagagagtacgcagctacaacaccttgtccatcactggtaaccagcatcccatcaaactaaagta caaggcacaaaagcagacaacaaaagctcagcagacaacagctttccagcagatatcccaagaagccaagcagattctga atgaatggtatgatactcacatttcacatccttacccaagtgatgaggagagatccatgctagccacacaaactggagtt ccagagtccaagatcaagtcttggttcgctaacaagagaagcagaagtcacaataccaagagacaagttcccaactactt catcaagaaattcccagagtacactacccatgtgcagatggtgagcatcagccgagaacttaccaggaagaccaagagac aacttctggacactacccttgatgtcacacagatgtgccgattttaa |
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Protein
| Protein ID | pfu_aug1.0_1892.1_66137.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1892.1_66137.t1 MTTSLQTSSSTTHYASYLQATPANQMPNHPMGSSLTTSPEIRSPTSTNHINSYYSRIPAYPATTSLQRLQNNPMFQDLQD LLTEECLHMQVPTNLVNTAWADHTTPTLPTPGQDMFSKHIRLQETLLQLRSDEKFRSSGLDIESKYSAEVGQIEVSRYQA LHAAGTNYSERQTVNNHFDNKRISLIQSCQSQIDAALSRCTNQSQIDAALSRCTTDILEIPTYPTQAASSFHSTETGCRS SAFQPYSNVSERSQPRTPEDVAVPDPNDVTVSSEELTQPGFSDSGCFSDDSASKTFNSTIDILQQAKSKQQIQPMMMLCP PIPTQGREKPPVXGDDEEDTQESKRQCPAVRMRGRSKQLTDEQTAILSAWYSQHINYPYPAEEDVASLTEATGLNDKQVK KWMSNKRVRSYNTLSITGNQHPIKLKYKAQKQTTKAQQTTAFQQISQEAKQILNEWYDTHISHPYPSDEERSMLATQTGV PESKIKSWFANKRSRSHNTKRQVPNYFIKKFPEYTTHVQMVSISRELTRKTKRQLLDTTLDVTQMCRF |
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