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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_18763.1_18565
Locus scaffold18763.1 : 2142 ... 16095 : -
To GenomeBrowser scaffold18763.1:2142..16095
Genes list of scaffold scaffold18763.1
Synonym pfu_aug2.0_252.1_07228

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_18763.1_18565.t1 1 1 Galactosyl_T 139 322 2.70451e-43 147.8 0.0 4.1058e-43 147.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_18763.1_18565.t1 gi|157132569|ref|XP_001656075.1| AAEL000383-PA [Aedes aegypti] 1.0e-39

Transcript
Transcript IDpfu_aug1.0_18763.1_18565.t1
Definition-
>pfu_aug1.0_18763.1_18565.t1
atgctgaatatttctctgtcaagtacacagaaccgattatgccaaataagtgaaaatattcaaactagaatagtattaca
ttcagacatactagtacatgatagaatgcttcctgattcagtcagatacgtgtatttacgacccagtggattagttaaag
agctttatcccgaaaacgaatgggtacagttccgaactataccttttgatgacgaatttaggtatccggtggaaacagac
atgacaaaactcactgaacttcagatcaaaggaaatggtagtttaattcgtgcagtcaatgaacataacttcaactatct
gaaaaatcctcattttttgtgcccaacaaagtcaaatagcagtagtatacctctcttgattcttataaaatcagcaccac
agtatcatggcttacggaatgttatacgaaaaacttggggcaaagagctaaggaagagagggagatacaaaatggcattc
cttcttggatattccagtcgctatcagcattatatcgatattgaacattactcacatcaagacattattcaggaggactt
catagatgcctattggaataatacatataaaactatcatggcattcaattgggcatctcagtattgctcaaatgcgcgaa
ccgttctatttctagatgatgacatgtttgttaatctgaacaatctagaaaagtacgttctggacttggacgaaaaaaga
aatcccattttattctcaggtattttagcggaaagaggtacgcccgtccgtgacgtcaagtcaaaatggtatgtgccgtg
gcaggattacccgtatgattattatcctaattatttggctggttctgccatattcgcatctataaatattgtgaggatgt
tttccaaagtctttccgtatgttagatactttggtatagacgatgtatatcttggaatagtggcatataagttaaatatt
acaccatcgaggactttacatctagacaacgataacttgcgtaatttcaaaaatttgtcacagctcatagcaaaccacgg
ttttagagatcatgtgctttacaaagaaacctacctcaactcaagtttcctcgacatgttgtga

Protein
Protein IDpfu_aug1.0_18763.1_18565.t1
Definition-
>pfu_aug1.0_18763.1_18565.t1
MLNISLSSTQNRLCQISENIQTRIVLHSDILVHDRMLPDSVRYVYLRPSGLVKELYPENEWVQFRTIPFDDEFRYPVETD
MTKLTELQIKGNGSLIRAVNEHNFNYLKNPHFLCPTKSNSSSIPLLILIKSAPQYHGLRNVIRKTWGKELRKRGRYKMAF
LLGYSSRYQHYIDIEHYSHQDIIQEDFIDAYWNNTYKTIMAFNWASQYCSNARTVLFLDDDMFVNLNNLEKYVLDLDEKR
NPILFSGILAERGTPVRDVKSKWYVPWQDYPYDYYPNYLAGSAIFASINIVRMFSKVFPYVRYFGIDDVYLGIVAYKLNI
TPSRTLHLDNDNLRNFKNLSQLIANHGFRDHVLYKETYLNSSFLDML

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