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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_185797.1_06797
Locus scaffold185797.1 : 1 ... 800 : -
To GenomeBrowser scaffold185797.1:1..800
Genes list of scaffold scaffold185797.1
Synonym pfu_aug2.0_30.1_00090

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_185797.1_06797.t1 gi|291241359|ref|XP_002740580.1| PREDICTED: testis-expressed sequence 36 protein-like [Saccoglossus kowalevskii] 1.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
trochophore 1
>Adult tissues
maleGonad 2
mantle 1

Transcript
Transcript IDpfu_aug1.0_185797.1_06797.t1
Definition-
>pfu_aug1.0_185797.1_06797.t1
ggcagggtaaagatgagagaacactaggaaggaaaatcatgctaccagaagtacgtctacatcacacagataaaactttc
ttaaagcatcatgatagaaaagccatcgatcacgatcttaatacaaattacggcatatcatatgataagaaggacagtga
taacaccacgcgtcgccgatatcccaggaggtataaaacgccacctagtgggccaataaggctcgacaccaccactacaa
attggttccgccatcccgacgtgcctcatcgaacaccaacccacgtactagccatctcacaagaaccattcctcaaacat
aacccatggaaatactctaaccatggaatgaagaaaatttacccgccttatgatagacagattgaacctctagtcaataa
ccaatttaacaaatacggcgctgcctatgctatgggtagtgaataa

Protein
Protein IDpfu_aug1.0_185797.1_06797.t1
Definition-
>pfu_aug1.0_185797.1_06797.t1
QGKDERTLGRKIMLPEVRLHHTDKTFLKHHDRKAIDHDLNTNYGISYDKKDSDNTTRRRYPRRYKTPPSGPIRLDTTTTN
WFRHPDVPHRTPTHVLAISQEPFLKHNPWKYSNHGMKKIYPPYDRQIEPLVNNQFNKYGAAYAMGSE

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