Gene
| Gene Model ID | pfu_aug1.0_18305.1_69185 |
|---|---|
| Locus | scaffold18305.1 : 7095 ... 21459 : - |
| To GenomeBrowser | scaffold18305.1:7095..21459 |
| Genes list of scaffold | scaffold18305.1 |
| Synonym | pfu_aug2.0_906.1_21261 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18305.1_69185.t1 | 1 | 1 | TSP_1 | 94 | 139 | 4.2e-11 | 42.7 | 2.2e-14 | 1.1e-10 | 41.4 |
| pfu_aug1.0_18305.1_69185.t1 | 1 | 1 | CUB | 185 | 254 | 3.3e-10 | 40.0 | 1.7e-13 | 8.6e-10 | 38.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18305.1_69185.t1 | gi|242014639|ref|XP_002427994.1| | hypothetical protein Phum_PHUM358480 [Pediculus humanus corporis] | 4.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_18305.1_69185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18305.1_69185.t1 ccagaatgtgcagggaaaaataataaaattcgtattttcaagctagccagggatgtttccggttctctggcggcgccatt aaaaaggaagtacatatcagaaacaaaggcagaaccggataataaatatgttctttttaactgtgatatattttcagaac aggcagctggtttttgctttgtctacgtcacaacttcaagacgaggctctgtatcagaacaagactcttactgtctttca gctcatcctgactcagtgatccctatagacggcggatggagtaattggtcaaaatggggacggtgctcggtcacgtgtgg tacaggaaaacagagccgctttcggtactgtaacaatccacatccggaacatggcggacgattctgtgatggcaatcccg tggaatggagaccttgttttcttccctgtcctgatatgcttccaaagacaccattgcattctgctgaggttaatggttcg tgtgcgtgcggttgtcatcttggagaaacggaaggggaaataatcgccactggaagatgcgaaggactgtctatttggct gatcaaagtggaggagaatcaccagatcagactttcgtttcgttactttgatctctataaagaccaacaatgggtgaaaa taaggagtggagagacctctagcgcggaccttgtagcaataagtcatggggagataactctgaccgaggtggtatcaacg acaaatagtatgctgatagagtttatgacacgatctaatacgtcattggtgatgccataccgtatacatgacgcagctac ggctcagccattacagctccccccatatccttatagagatatccacgtgcatgggtttattgctgtatactccgcacngg gaagtatatgggacagtaaagtaaccattgttggaatttctctgtgttcagttatcgttcttgtcgctgttgcttttgca atatatcatcgagttttctataaacgtgatcacaaatacaccattacgtcacaagaggaaacgcctactcacatggttaa aagtactagcatgcatagtaccccgagtcaccacagtgctttaagtcaaggaatagaaatagactacgatatggagcgcc ctcttacgggaggaactccaaggaaaaagtaccgaaaggacagtgcggcgctcgtatcaagagggtcatctatttccagt aacagaagcaatactagcaaaaagaatttgaaaattaaaacaaaggcagatgtagaaccaggtgggagtcctaaaccctc taatagatattattctccttttcctagtcctcatgtgaataatgagacagtcacagagattaaagaagaaagtaatagtc ttttcaatactagtcctttattaaatagaaaacctagatctccaaaaatacatccatcgccgagattcaaaagaccaagt cctttgagtccggcgtcgccaataaaaacaaaacatgaacttttaacgaaaaaacgtaaagacagaagtgccaaacggaa agaagatagaatcgtaatgggtgctgcagaaactccagtgtatgaagagataaaacaaatagcaagcacgcctggttcca ctggatccgctacacctgtaggaaaaatagatttcgttgatgagggtacattaaaaaggaagaaaggtgacaagtatggg gaaagtgatcatgaccattctagctgtgctgatacacttgtatcagatcataaacctagtcaaattacccaggatgctat tcaactacatactgtaaaaacggtagatggtgaaacccgaaaaccaggatctggaacgtctgatgattcttgttctcctg acaagtcagaaggcgggaaacaacagacgacatcatttattgaagaatccaagaaagataaagaaccgaaacctcgtagg ccaacctcactcatagaaacttatcaaaaacccataaaatctatctcacttccgtccataaacaaagacgctactgcaac acttgacggtggcaaaactgtctttcacattccaaagctggaacgtcacaaagccttgccaaaacctgatggtcaaagtc ctaaaagtccccgtcagcaaaactcaaagtcctcaacaccaaaaagtgttcgaagctctagtgttcatagttcccggagc aaactgactctgtcacctgcacgtagtatacataccccctccgaggtggcgtccgaaggtttagaaatggaatatgatga ctatattgaatatgatgacaccttctcttattttgaccctctagaaaccgagaagttacaatggaaaggtgttgaaaaga ttggtacaactaaagccaaagaaaatggacaaaaagacgagaagtag |
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Protein
| Protein ID | pfu_aug1.0_18305.1_69185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18305.1_69185.t1 PECAGKNNKIRIFKLARDVSGSLAAPLKRKYISETKAEPDNKYVLFNCDIFSEQAAGFCFVYVTTSRRGSVSEQDSYCLS AHPDSVIPIDGGWSNWSKWGRCSVTCGTGKQSRFRYCNNPHPEHGGRFCDGNPVEWRPCFLPCPDMLPKTPLHSAEVNGS CACGCHLGETEGEIIATGRCEGLSIWLIKVEENHQIRLSFRYFDLYKDQQWVKIRSGETSSADLVAISHGEITLTEVVST TNSMLIEFMTRSNTSLVMPYRIHDAATAQPLQLPPYPYRDIHVHGFIAVYSAXGSIWDSKVTIVGISLCSVIVLVAVAFA IYHRVFYKRDHKYTITSQEETPTHMVKSTSMHSTPSHHSALSQGIEIDYDMERPLTGGTPRKKYRKDSAALVSRGSSISS NRSNTSKKNLKIKTKADVEPGGSPKPSNRYYSPFPSPHVNNETVTEIKEESNSLFNTSPLLNRKPRSPKIHPSPRFKRPS PLSPASPIKTKHELLTKKRKDRSAKRKEDRIVMGAAETPVYEEIKQIASTPGSTGSATPVGKIDFVDEGTLKRKKGDKYG ESDHDHSSCADTLVSDHKPSQITQDAIQLHTVKTVDGETRKPGSGTSDDSCSPDKSEGGKQQTTSFIEESKKDKEPKPRR PTSLIETYQKPIKSISLPSINKDATATLDGGKTVFHIPKLERHKALPKPDGQSPKSPRQQNSKSSTPKSVRSSSVHSSRS KLTLSPARSIHTPSEVASEGLEMEYDDYIEYDDTFSYFDPLETEKLQWKGVEKIGTTKAKENGQKDEK |
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