Gene
| Gene Model ID | pfu_aug1.0_1824.1_37130 |
|---|---|
| Locus | scaffold1824.1 : 63094 ... 82695 : - |
| To GenomeBrowser | scaffold1824.1:63094..82695 |
| Genes list of scaffold | scaffold1824.1 |
| Synonym | pfu_aug2.0_759.1_31137 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1824.1_37130.t1 | 1 | 1 | NDT80_PhoG | 181 | 326 | 3.8e-28 | 98.7 | 2.2e-30 | 6.6e-27 | 94.7 |
| pfu_aug1.0_1824.1_37130.t1 | 1 | 1 | Peptidase_S74 | 374 | 435 | 7.4e-13 | 48.4 | 5.5e-16 | 1.6e-12 | 47.3 |
| pfu_aug1.0_1824.1_37130.t1 | 1 | 1 | MRF_C1 | 455 | 490 | 4.6e-21 | 73.5 | 2.7e-24 | 8.0e-21 | 72.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1824.1_37130.t1 | gi|291228384|ref|XP_002734150.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1824.1_37130.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1824.1_37130.t1 atgcatcaacacatgtacccgccccatcatcgcccgccgggcctactgccacatgcccacaagatgccgcctgggtataa cgagcccctcaatcacctgctccctacccaccccgctcctcagtcctccacccctctacctctgccaccgacacaagcca acccatctatacccctgtctccaccccacctcagtccggtgaatggctgtaacaagaagagaaaattctccgactcgcca aacagcagtctcaccaacgctctactggctggacgaaatggtgtactcaatataaaacaggagcctaatggatctggctt catgaacagttatataggagactgtgatgatgattttgggtatgacccagacaacagtagtacaggatatctggacagtt cttaccaggtcatcaagtggtcacaatatctacagaaagaatgggcgacactcaaaaatgaacaactaaaagacataccc ccgccatcatatagagtggatgcagacaagggattcaacttctcccagcctgacgactcatttgtctgccagaaaaagaa tcacttccaggtcacagttcacacgctggtcaacggcgaccctaaatatgtcacaacgccagacggagtcaaaaagattg acagctttcatctacacttctttggaatcaagatggagtcacaaactcagactataaaaatagagcaatcacagtcagac cgcagtaaaaaaccattctacccagtcagagttgacttggtcccagatcagaccaataaaatcacagtcggtaggttaca cttcagtgagactactgccaataatatgagaaagaaggggaggccaaatcctgatcagcgatatttcatgctcgtcgtag gattgtatgcccacagtggcgaaaataaattcttggtggctggcagtgtatctgagaaaatcattgtcagggcatccaat cctggtcagtttgacaatgatgttgatgtaaactggcagaaaggacagacgggggatagtgtgttccatgtgggcagggt gggcattaatactgaccacccggaggaagcactgaccgtccacggaaacatgagtctgacgggaagaatgtatcaaccgt ctgacatcagggcaaaggaaaacctcaaagaggttaattccaaaaagcagttggaaaaccttgccaagctgaaaatctac gagtacaattacagcgaagatttcgcagacactgttggtatccccgaaaacggaagaaaagatacaggtgtcatagctca agaggtcaaggacatattacctgatgcagtacgagaaacaggagatgtaccgttaccaaatggtgacgtcatagaaaatc tcctggttgtagataaggaacgtgttttcatggaaaatgtgggagctgtgaaagaattgtgtaaattaacagacaatttg gaagtgagaatagatgaactagaaaaaatgaataaaaaacttgcaaagttgaaaagatatgacagtttaaaatctactgt gagctccaagtcttcatgtagtgtcagtactgtcagttcttcacctccaaagaaatcatcatcttcatcatccccgtcag cagccaaatataatcataatcgtcacaaaccgtcaagtcgtaaaccgtcggacatgaaaccagcggtagataacggctgg tgtagtaaccgattcatacaggttaccatcttcacattgatactcatcatggctctgtgaattccatcagggacagcagt tgcctttctttgttataaccacacccagcaggactgtcagacttcacaaccctcggaattagacgatactgtcactaatc agaatttcatgctggtttccaaggacattgataatatcacaacttgtttacatcagatacctgcataa |
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Protein
| Protein ID | pfu_aug1.0_1824.1_37130.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1824.1_37130.t1 MHQHMYPPHHRPPGLLPHAHKMPPGYNEPLNHLLPTHPAPQSSTPLPLPPTQANPSIPLSPPHLSPVNGCNKKRKFSDSP NSSLTNALLAGRNGVLNIKQEPNGSGFMNSYIGDCDDDFGYDPDNSSTGYLDSSYQVIKWSQYLQKEWATLKNEQLKDIP PPSYRVDADKGFNFSQPDDSFVCQKKNHFQVTVHTLVNGDPKYVTTPDGVKKIDSFHLHFFGIKMESQTQTIKIEQSQSD RSKKPFYPVRVDLVPDQTNKITVGRLHFSETTANNMRKKGRPNPDQRYFMLVVGLYAHSGENKFLVAGSVSEKIIVRASN PGQFDNDVDVNWQKGQTGDSVFHVGRVGINTDHPEEALTVHGNMSLTGRMYQPSDIRAKENLKEVNSKKQLENLAKLKIY EYNYSEDFADTVGIPENGRKDTGVIAQEVKDILPDAVRETGDVPLPNGDVIENLLVVDKERVFMENVGAVKELCKLTDNL EVRIDELEKMNKKLAKLKRYDSLKSTVSSKSSCSVSTVSSSPPKKSSSSSSPSAAKYNHNRHKPSSRKPSDMKPAVDNGW CSNRFIQVTIFTLILIMALXIPSGTAVAFLCYNHTQQDCQTSQPSELDDTVTNQNFMLVSKDIDNITTCLHQIPA |
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