Gene
| Gene Model ID | pfu_aug1.0_1815.1_37123 |
|---|---|
| Locus | scaffold1815.1 : 73806 ... 92895 : + |
| To GenomeBrowser | scaffold1815.1:73806..92895 |
| Genes list of scaffold | scaffold1815.1 |
| Synonym | pfu_aug2.0_315.1_17278 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1815.1_37123.t1 | 1 | 1 | PAP2 | 105 | 233 | 1.9e-18 | 66.4 | 7.2e-22 | 3.5e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1815.1_37123.t1 | gi|326671007|ref|XP_697507.5| | PREDICTED: lipid phosphate phosphohydrolase 1 isoform X1 [Danio rerio] | 2.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1815.1_37123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1815.1_37123.t1 atgcttcttaaaaatataataaaatttttgtatcatattcctgttcagttaaagaaaacagaaataattggattaccagt tttactgatatacaaaggggcattctcaccgtacaaacaaggatttttctgtgacgacataaacatacgttacccctaca gagaggacacgatatcagatacgctgctgctcgtcattggcttcacaacatctttcattttgtttattgttacggagata ccgaaggtgtgtaatgccaaagaaagcatatcacggagtaaagatttccggatcctgctgaagatcagcatcgtttttgt ttttggttttacaattttacaggccgtatgccaaagtctgaaatatgccactggacgtttacggccaaacttcttggacg tctgtaaaccagatttcagcaaaattaattgttcacagggatacatcacagaatatgaatgcacagagaccaaatatggg cctagggttatagagaaaagcagggcatcgtttccatctggccatgccgcattctcaatgtattgtgcaatatttgtttc gatattccttgagatgaggtttcaagtatggttctctcgagcattaaagcctgtgattcaggtgatcttgatgatgatgt cacttttatgttcgctgactcgtatctatgacaacaaacaccacgtgacagatctagtaaattcaaatcgtcgtgattat caaaattatctacgatcttttgttcattattatctaaacccttcatctcttaaatatttccccgaattaggagcagcttc gctgacatatcagataaaattcattgaaattgcaacccgacaacataattgtaggtttccttacgaaattgaatag |
|
Protein
| Protein ID | pfu_aug1.0_1815.1_37123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1815.1_37123.t1 MLLKNIIKFLYHIPVQLKKTEIIGLPVLLIYKGAFSPYKQGFFCDDINIRYPYREDTISDTLLLVIGFTTSFILFIVTEI PKVCNAKESISRSKDFRILLKISIVFVFGFTILQAVCQSLKYATGRLRPNFLDVCKPDFSKINCSQGYITEYECTETKYG PRVIEKSRASFPSGHAAFSMYCAIFVSIFLEMRFQVWFSRALKPVIQVILMMMSLLCSLTRIYDNKHHVTDLVNSNRRDY QNYLRSFVHYYLNPSSLKYFPELGAASLTYQIKFIEIATRQHNCRFPYEIE |
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