Gene
| Gene Model ID | pfu_aug1.0_1795.1_22762 |
|---|---|
| Locus | scaffold1795.1 : 49266 ... 65460 : + |
| To GenomeBrowser | scaffold1795.1:49266..65460 |
| Genes list of scaffold | scaffold1795.1 |
| Synonym | pfu_aug2.0_1885.1_18585 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1795.1_22762.t1 | 2 | 1 | Fibrinogen_C | 114 | 147 | 7.1e-14 | 51.9 | 0.7 | 2100.0 | -2.0 |
| pfu_aug1.0_1795.1_22762.t1 | 2 | 2 | Fibrinogen_C | 203 | 258 | 7.1e-14 | 51.9 | 6.3e-17 | 1.9e-13 | 50.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1795.1_22762.t1 | gi|297682212|ref|XP_002818821.1| | PREDICTED: angiopoietin-2 isoform X2 [Pongo abelii] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_1795.1_22762.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1795.1_22762.t1 atggccattgtcgaaattgtggactttgggaattttatccatataagcaaacaacaacgtcatttcgacgttatcgggga aaatggcgtcaaaaaccttcgcattcaaaatgcaataaaaacattaataccaaacgtaacatctcttgtgatactctctt tgatatcggtcaggtgtgacactggaagtgatgataattctatcgtcaaatttgctcaattgaacattcaggattcatta aactcgttgcaaaaacagcttaattttgaaacatcaacacgtcttcagtttgataaagatttgactgagatgatgaggct atatagggttatgagtggtgaaatagaaaggatttcaaatggtaacgctaaactgaagcaggagttaatgtctctaatga ataattcagacgatacggaccagctgacgaacttagtaaaggttgttactgagatgagaaaagatataactgatatatcg atgaaacaggacaaattcgccggagatgtacaagactatctgaatacagtgaacagtcagattaatatgctgaatacaac actatcagtcatgccaaacgtgaccaaacttcaaacaaaaaagccaggagattgtaacgagatactaaattttgaaccca actccagttccggcgtgtatactatttttcctgaaggatctgttgggtattcggtatactgtgatatgacaaaccaaggt gggggatggacggtaattcaaaggagaattaacggtgttttgaatttgataaaacctggcaagaatacaaagatggattt ggagatctgtgtggcgagcactggatag |
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Protein
| Protein ID | pfu_aug1.0_1795.1_22762.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1795.1_22762.t1 MAIVEIVDFGNFIHISKQQRHFDVIGENGVKNLRIQNAIKTLIPNVTSLVILSLISVRCDTGSDDNSIVKFAQLNIQDSL NSLQKQLNFETSTRLQFDKDLTEMMRLYRVMSGEIERISNGNAKLKQELMSLMNNSDDTDQLTNLVKVVTEMRKDITDIS MKQDKFAGDVQDYLNTVNSQINMLNTTLSVMPNVTKLQTKKPGDCNEILNFEPNSSSGVYTIFPEGSVGYSVYCDMTNQG GGWTVIQRRINGVLNLIKPGKNTKMDLEICVASTG |
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