Gene
| Gene Model ID | pfu_aug1.0_17778.1_32853 |
|---|---|
| Locus | scaffold17778.1 : 12290 ... 19865 : - |
| To GenomeBrowser | scaffold17778.1:12290..19865 |
| Genes list of scaffold | scaffold17778.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17778.1_32853.t1 | 2 | 1 | Ribosomal_L23eN | 13 | 20 | 3.0e-19 | 68.7 | 0.19 | 1400.0 | -0.7 |
| pfu_aug1.0_17778.1_32853.t1 | 2 | 2 | Ribosomal_L23eN | 26 | 76 | 3.0e-19 | 68.7 | 4.0e-23 | 3.0e-19 | 68.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17778.1_32853.t1 | gi|22758866|gb|AAN05592.1| | ribosomal protein L23a [Argopecten irradians] | 6.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_17778.1_32853.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17778.1_32853.t1 atgaaggagagtgtctatttttatatgaaataggtggccaaaaaagactcaaagaaggatggcaagcaagggaagcagac agataaagccttgaaggccaagaaagccgttctcagaggtgtccatgctaagaggaacaaaaaattccgaccctcggtac acttcagacggcctaagaccctgtcgttacccagggctcctaaatatcctcgtaagagtgtgtcaaaaaccaacaaacca gatggagagaagaaggcatacgtccgtctggccccagattatgatgcactggatgtcgccaacaagattggaatcatcta a |
|
Protein
| Protein ID | pfu_aug1.0_17778.1_32853.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17778.1_32853.t1 MKESVYFYMKXVAKKDSKKDGKQGKQTDKALKAKKAVLRGVHAKRNKKFRPSVHFRRPKTLSLPRAPKYPRKSVSKTNKP DGEKKAYVRLAPDYDALDVANKIGII |
|