Gene
| Gene Model ID | pfu_aug1.0_17778.1_32851 |
|---|---|
| Locus | scaffold17778.1 : 396 ... 4859 : + |
| To GenomeBrowser | scaffold17778.1:396..4859 |
| Genes list of scaffold | scaffold17778.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17778.1_32851.t1 | 1 | 1 | Complex1_LYR | 6 | 60 | 2.2e-15 | 56.1 | 8.6e-19 | 2.5e-15 | 55.9 |
| pfu_aug1.0_17778.1_32851.t1 | 1 | 1 | Complex1_LYR_1 | 6 | 62 | 6.1e-13 | 48.7 | 2.5e-16 | 7.4e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17778.1_32851.t1 | gi|149632950|ref|XP_001506914.1| | PREDICTED: LYR motif-containing protein 9 [Ornithorhynchus anatinus] | 1.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_17778.1_32851.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17778.1_32851.t1 atgccaggctacaaggaaccagttcaactttatagacacctgttaaaatgcataaaagttcttcccaaggacgctcaggc ttattacagacattacataagacagggatttaaaagtcattctgatgaaacagaccctgaaagaattaagcagattatag aaagagcaaaagaagatgtacagtatattgtggagaagtacaagaaatga |
|
Protein
| Protein ID | pfu_aug1.0_17778.1_32851.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17778.1_32851.t1 MPGYKEPVQLYRHLLKCIKVLPKDAQAYYRHYIRQGFKSHSDETDPERIKQIIERAKEDVQYIVEKYKK |
|