Gene
| Gene Model ID | pfu_aug1.0_17766.1_25656 |
|---|---|
| Locus | scaffold17766.1 : 1 ... 21117 : + |
| To GenomeBrowser | scaffold17766.1:1..21117 |
| Genes list of scaffold | scaffold17766.1 |
| Synonym | pfu_aug2.0_97.1_23444 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | ABC_membrane | 110 | 378 | 1.50001e-40 | 139.4 | 6.3e-33 | 2.5e-30 | 105.8 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | ArgK | 437 | 481 | 3.5e-06 | 25.9 | 0.0074 | 3.0 | 6.5 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | T2SE | 439 | 481 | 5.7e-07 | 28.7 | 0.0061 | 2.5 | 6.9 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | ABC_tran | 440 | 574 | 0.0 | 206.8 | 3.8e-21 | 1.5e-18 | 67.4 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | DUF258 | 441 | 483 | 6.8e-10 | 38.3 | 5.3e-06 | 0.0021 | 17.2 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | AAA_29 | 446 | 470 | 2.2e-08 | 33.4 | 0.0012 | 0.48 | 9.9 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | AAA_16 | 447 | 480 | 4.2e-11 | 43.1 | 0.00018 | 0.072 | 13.0 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | AAA_25 | 447 | 489 | 4.9e-10 | 39.1 | 5.4e-05 | 0.022 | 14.1 |
| pfu_aug1.0_17766.1_25656.t1 | 5 | 1 | SMC_N | 450 | 475 | 6.5e-10 | 38.6 | 0.015 | 5.9 | 6.0 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | AAA_17 | 452 | 469 | 4.3e-06 | 27.5 | 0.043 | 17.0 | 6.2 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | MMR_HSR1 | 453 | 490 | 3.2e-13 | 49.6 | 6.5e-06 | 0.0026 | 17.6 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | Miro | 453 | 492 | 1.0e-12 | 48.6 | 9.4e-07 | 0.00038 | 20.9 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 1 | AAA_21 | 453 | 473 | 3.1e-06 | 27.3 | 0.019 | 7.7 | 6.3 |
| pfu_aug1.0_17766.1_25656.t1 | 5 | 2 | SMC_N | 511 | 620 | 6.5e-10 | 38.6 | 0.013 | 5.3 | 6.2 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | ABC_membrane | 730 | 854 | 1.50001e-40 | 139.4 | 9.7e-14 | 3.9e-11 | 42.8 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | ABC_membrane | 890 | 933 | 1.50001e-40 | 139.4 | 0.25 | 100.0 | 2.1 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | DUF258 | 993 | 1038 | 6.8e-10 | 38.3 | 1.3e-06 | 0.00054 | 19.1 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | ArgK | 993 | 1037 | 3.5e-06 | 25.9 | 0.0079 | 3.2 | 6.4 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | ABC_tran | 995 | 1045 | 0.0 | 206.8 | 9.6e-12 | 3.8e-09 | 36.9 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | T2SE | 998 | 1036 | 5.7e-07 | 28.7 | 0.0055 | 2.2 | 7.1 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | AAA_29 | 999 | 1025 | 2.2e-08 | 33.4 | 0.00066 | 0.27 | 10.8 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | AAA_16 | 1001 | 1038 | 4.2e-11 | 43.1 | 0.00011 | 0.046 | 13.7 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | AAA_25 | 1003 | 1031 | 4.9e-10 | 39.1 | 0.00054 | 0.22 | 10.9 |
| pfu_aug1.0_17766.1_25656.t1 | 5 | 3 | SMC_N | 1006 | 1030 | 6.5e-10 | 38.6 | 0.011 | 4.5 | 6.4 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | AAA_17 | 1007 | 1023 | 4.3e-06 | 27.5 | 0.065 | 26.0 | 5.6 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | MMR_HSR1 | 1008 | 1045 | 3.2e-13 | 49.6 | 9.5e-06 | 0.0038 | 17.1 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | Miro | 1008 | 1047 | 1.0e-12 | 48.6 | 2.8e-06 | 0.0011 | 19.4 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 2 | AAA_21 | 1008 | 1038 | 3.1e-06 | 27.3 | 0.019 | 7.8 | 6.3 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | ABC_tran | 1096 | 1234 | 0.0 | 206.8 | 5.8e-31 | 2.3e-28 | 99.1 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | AAA_25 | 1096 | 1117 | 4.9e-10 | 39.1 | 0.00083 | 0.33 | 10.3 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | AAA_29 | 1096 | 1117 | 2.2e-08 | 33.4 | 0.00013 | 0.051 | 13.0 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | ArgK | 1097 | 1133 | 3.5e-06 | 25.9 | 0.0011 | 0.44 | 9.2 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | MMR_HSR1 | 1098 | 1118 | 3.2e-13 | 49.6 | 0.00027 | 0.11 | 12.4 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | Miro | 1098 | 1116 | 1.0e-12 | 48.6 | 0.018 | 7.3 | 7.1 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | AAA_17 | 1098 | 1116 | 4.3e-06 | 27.5 | 0.0015 | 0.6 | 10.9 |
| pfu_aug1.0_17766.1_25656.t1 | 5 | 4 | SMC_N | 1100 | 1117 | 6.5e-10 | 38.6 | 0.033 | 13.0 | 4.9 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | DUF258 | 1100 | 1118 | 6.8e-10 | 38.3 | 0.049 | 20.0 | 4.3 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | AAA_21 | 1100 | 1167 | 3.1e-06 | 27.3 | 0.00077 | 0.31 | 10.9 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | AAA_16 | 1101 | 1233 | 4.2e-11 | 43.1 | 0.00038 | 0.15 | 12.0 |
| pfu_aug1.0_17766.1_25656.t1 | 3 | 3 | T2SE | 1101 | 1131 | 5.7e-07 | 28.7 | 0.00039 | 0.16 | 10.8 |
| pfu_aug1.0_17766.1_25656.t1 | 5 | 5 | SMC_N | 1126 | 1274 | 6.5e-10 | 38.6 | 3.1e-06 | 0.0012 | 18.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17766.1_25656.t1 | gi|283855787|gb|ADB45217.1| | ATP-binding cassette sub-family C member 1 [Trichoplusia ni] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_17766.1_25656.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17766.1_25656.t1 aaaactgccgaggagagagcttcactactatcaagaattacatttacatggttaaacgatttgctgcgacttggctacaa aaagactcttgaaaataaggatttatcggaactggcagaagaaagaaaggctgaaaacgcattttcccacttcaatccac actggcaaagagaattcctgaaagcaaagagtacaaacgacgctacacaagagaatgaaaccctagaaacatcagaggaa gcaaaaagtgatgaaaaaaccgaagtcaagaaagttgaagggagtgttgtgcgagccattgttcttgcttttggtctgac ttattcctatgcagtcctaatggaaattgttctcaagctttatgaattttctgagccaatggttttaaaacaacttatga agacggtagaggacgaaaaccagacattactcagaggcgtcttgtttgctgtcatgctctttgtgataaattccctcagg agtcttcacggaaatcagctgatttatcataaatgtaacttggaatacagactgaaagctgctctcatgtcttccattta ctcaaagatgctgaaaatgtcccatgccgccaggaagtcctcaactgtaggtgaaatcgtcaacttgatgtccgtagact gtggaaggtttgccactatggtacattggttccactacatccttatagcaccaattcaggttttcgtcgccatgtatttg ttatggcttgagatgggttcatgtgccatcgctggattcttagccatcgcagttttctttcctatccatggtttactcgg aagaaaaactagagctcttcatattaaattatcggagaccaaagattcgaggattaaacttatgaatgagattctcaacg gtattaaggtcatgaagctgtacacatgggagaaatcctttgaaaagaaagtccaggacatcagggagaaagagttgtcc ataatgagaaaaataaagatctacgattctatcagtactcttgtttggaatatcggaccattcttggtatccttgtccac ctttgctctgtatgtcctaggcgatgactcccatactctcagcgtggagaaagcctttgtttccatctctatcttccaca tattgagttggtcgatgtcagtgattcctcatattatgactggaatgaaccagggatttgtttccatcaagagaatcaac aagtttctgaacagcgaagaactggatgatgacgttataagcagaagcaaagattatgaatcagcaatatcagtgaaaga cgcctccttctcgtgggacagaaaggaagccccacttctgaaaaatatcaacatagaaattcctgaaggatcactgatag ccgttgttgggtctgttggtgtaggaaaatcttccctcctctccgccatgctgggagaaatggacaaaaaatctggaaat gtgaacatcaagggaacaactgcttatgtcgctcagcaagcttggatccaaaataacacactgaaagacaacattctttt tggacgtccatatgacaaagatgtgtacgaaaacatcattgagagttgtgctcttggtcctgatatagacatgttaccag gaggtcatctggctgaaataggagaaaagggaattaatctgagcgggggacaaaagcagagggtgaacatggcacgagct gtttaccaggatgctgatatttacctgtttgatgacccactcagtgcagtagactcacatgttggaaaacatatattcaa taatgtaatcggaagaaatggcgtcctcaagaacaaaaccagaattttagtaactcatggtgtcaacttcttgccaaaag ttgatcagataatcaccattcaagatggggcaatttcagaaatgggaacatatgaagaacttaaggcacgatctggagca tttgcccagttcttgaaaacttacatgaaagaggatgattcaagtgattccagtgaaagtgaaaatgagggcaaaggtaa aaaatcaacaaaaagaaggcattctgagagaacccaagataattcacaggaacaaggcaacacaagtcagaataatatca atactgaagatgagtccaaagcaatcggagaggaatccgttgagacaggaaagattaaatttggcacgttcgcgtcttat ctatccaaccttgggagtgttctgtgtttcttcatctgcctctccttcgtaattttccgagtagccgatatttgctctag tttttggctgagtgattggacaacggatgtaaaagttgatactactggtcatatcaacctgaatactactcaaaacaaca tcgggttagaagagcaaaaatattatcgacttggaatgtttggtgtctttggatttacgcaagctatagtagcattcata caagctgcaatggtattcttgggtggactgacagccagcaggaaccttcagagcaaaatgctgcgcaacatattatcttc tccaatgagcttcttcgacacaaacccagttggtagaatcgttactagattcagcaaggatatcgatgttgttgattggc tggcccacagactgaagaactatggagaatgtgtatcccgcatgttaactattcctctcctggttggctacaatgtacca tggttcctagtttcgctgatccccatatatttcctattcaatcgcatacaggtatctttgtctacctttgctctgtatgt ccttggcgacgactctcatacactcagcgtagagaaggcatttgtctccatttccattttccacatactgagttggtcaa tgtctgtgatccctcatattatgactggaatgaaccagggcttcatttccatcaagagaatcaacaagtttctcaacagt gaagagttggatgatgacgttataagcagaagcaaaggttatgaatctgctatatccgtgaaagacgcctctttctcatg ggacagaaacgacgctccactcctgaaagatatcaactttgagattcatgaaggatctttgatagctgttgttgggtctg tcggtgtaggaaaatcttccctcctctccgccatgttgggcgaaatggacaaaagatctggaaatgtgaacatcaaggga acaactgcttatgtcgctcaacaagcctggatccaaaataacacactgaaagacaacattctctttggacgtccatatga caaagatgtgtacgaaaacatcattgagagttgtgctcttggtcctgatatagacatgttaccaggaggtcatctggctg aaataggagagaaggttggcattgtcggaagaactggaagtggtaaatcaaccttaaccttggcattattccggatcatt gaaagcgcgggagggaatatcaccattgatgatgtagacatttcaaaaatagggcttcatgatctgagagccaagcttac catcattccacaggatccagtcatcttctcaggaacactacggatgaatcttgaccccttcgagcaatactctgacgagg aaatttggacagcattagagcatgcgcatcttggaaagttcgtgagatctttacccgataaacttaagcacgagtgttca gaaggcggagaaaatctgagtgttggacagcggcaactgatctgtttggcacgtgcactcttgaagaaaacgaaaattct cattcttgatgaagctacagctgctgttgacatggaaacggatgatctaattcagaaaactataagaactgagtttgctg attgtactgttctcactattgcacatcgacttaacacaattatggactataaaagaatcatggtgctagacaaaggtaaa atagcggagtttgactcaccagcaagactgctggacaacagtgacggtatattctatggaatggcacgagattcgaattt agtttaa |
|
Protein
| Protein ID | pfu_aug1.0_17766.1_25656.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17766.1_25656.t1 KTAEERASLLSRITFTWLNDLLRLGYKKTLENKDLSELAEERKAENAFSHFNPHWQREFLKAKSTNDATQENETLETSEE AKSDEKTEVKKVEGSVVRAIVLAFGLTYSYAVLMEIVLKLYEFSEPMVLKQLMKTVEDENQTLLRGVLFAVMLFVINSLR SLHGNQLIYHKCNLEYRLKAALMSSIYSKMLKMSHAARKSSTVGEIVNLMSVDCGRFATMVHWFHYILIAPIQVFVAMYL LWLEMGSCAIAGFLAIAVFFPIHGLLGRKTRALHIKLSETKDSRIKLMNEILNGIKVMKLYTWEKSFEKKVQDIREKELS IMRKIKIYDSISTLVWNIGPFLVSLSTFALYVLGDDSHTLSVEKAFVSISIFHILSWSMSVIPHIMTGMNQGFVSIKRIN KFLNSEELDDDVISRSKDYESAISVKDASFSWDRKEAPLLKNINIEIPEGSLIAVVGSVGVGKSSLLSAMLGEMDKKSGN VNIKGTTAYVAQQAWIQNNTLKDNILFGRPYDKDVYENIIESCALGPDIDMLPGGHLAEIGEKGINLSGGQKQRVNMARA VYQDADIYLFDDPLSAVDSHVGKHIFNNVIGRNGVLKNKTRILVTHGVNFLPKVDQIITIQDGAISEMGTYEELKARSGA FAQFLKTYMKEDDSSDSSESENEGKGKKSTKRRHSERTQDNSQEQGNTSQNNINTEDESKAIGEESVETGKIKFGTFASY LSNLGSVLCFFICLSFVIFRVADICSSFWLSDWTTDVKVDTTGHINLNTTQNNIGLEEQKYYRLGMFGVFGFTQAIVAFI QAAMVFLGGLTASRNLQSKMLRNILSSPMSFFDTNPVGRIVTRFSKDIDVVDWLAHRLKNYGECVSRMLTIPLLVGYNVP WFLVSLIPIYFLFNRIQVSLSTFALYVLGDDSHTLSVEKAFVSISIFHILSWSMSVIPHIMTGMNQGFISIKRINKFLNS EELDDDVISRSKGYESAISVKDASFSWDRNDAPLLKDINFEIHEGSLIAVVGSVGVGKSSLLSAMLGEMDKRSGNVNIKG TTAYVAQQAWIQNNTLKDNILFGRPYDKDVYENIIESCALGPDIDMLPGGHLAEIGEKVGIVGRTGSGKSTLTLALFRII ESAGGNITIDDVDISKIGLHDLRAKLTIIPQDPVIFSGTLRMNLDPFEQYSDEEIWTALEHAHLGKFVRSLPDKLKHECS EGGENLSVGQRQLICLARALLKKTKILILDEATAAVDMETDDLIQKTIRTEFADCTVLTIAHRLNTIMDYKRIMVLDKGK IAEFDSPARLLDNSDGIFYGMARDSNLV |
|