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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_177.1_50694
Locus scaffold177.1 : 101516 ... 106498 : +
To GenomeBrowser scaffold177.1:101516..106498
Genes list of scaffold scaffold177.1
Synonym pfu_aug2.0_1252.1_08285

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_177.1_50694.t1 1 1 Sema 47 325 8.7e-09 34.4 1.3e-11 2.0e-07 29.9

Transcript
Transcript IDpfu_aug1.0_177.1_50694.t1
Definition-
>pfu_aug1.0_177.1_50694.t1
atgacgtttttgtttgtgatgctaaatatattggtactgtgtttattgactgcatgtgcccaaagtggtagcatcatcgg
aaaggggtatcatcaacggagtttctttaattttagtggaaaatttgacaatatccgaaatcttgcatttgacgagaatt
cgagcacactttatggtggtggcaggaacattttgctacttgtaaatgcagaagattttaacctaattggtaattcttcc
atcgaaactaattgtggtgaagtttcctgctctaatgaaagtcttgtcctagaagttatttcaagtaatgatggagcatt
cttactgtcctgtgccacaccgttgggtgattgtcagaaaagaaatttgagagacttgacagaattaaaccctaacctgg
tacaaagaagtccaatttctagttcgactataaacagtaacgttgcaagacttgttacaacttcaaataatggggagata
ttatactttgcgaggaattactcgactttcccagatcgaagtgtcacatattatccaattttagcagtaaatccagattc
gactgatcgattattttcctcgatcaccgctatgagtattcaaatgaaagatgagtataatatgaagtatccaatagatt
ttaaagcaatcgtagaaagtgacaattttgtttatttactgtctaaccagaactcatcgacaaaaatttcaaaaatatgc
aaacattctaagtcagaaaaattggcctacgaggatatgtttttgacttgttctcgggggcatactcagtttccttttgt
gaaagatacagtgatgtggaaagaggatggacagtttgttcttatcactctgttcacgttacatcaggaatcggataatc
caagagacgaaggtgcaatctgtgtgttttcagagaaagagattcttgaacattttcttcagtctcgccgtcaaagattt
aaatgtaatgaaaaccaaaaccttgacgagaaagatgtcatattcaacggggtacagagagagatattatatggatgtat
cgatgttacatacgcacccgtaagtgttaaacatcttcgaattcaatag

Protein
Protein IDpfu_aug1.0_177.1_50694.t1
Definition-
>pfu_aug1.0_177.1_50694.t1
MTFLFVMLNILVLCLLTACAQSGSIIGKGYHQRSFFNFSGKFDNIRNLAFDENSSTLYGGGRNILLLVNAEDFNLIGNSS
IETNCGEVSCSNESLVLEVISSNDGAFLLSCATPLGDCQKRNLRDLTELNPNLVQRSPISSSTINSNVARLVTTSNNGEI
LYFARNYSTFPDRSVTYYPILAVNPDSTDRLFSSITAMSIQMKDEYNMKYPIDFKAIVESDNFVYLLSNQNSSTKISKIC
KHSKSEKLAYEDMFLTCSRGHTQFPFVKDTVMWKEDGQFVLITLFTLHQESDNPRDEGAICVFSEKEILEHFLQSRRQRF
KCNENQNLDEKDVIFNGVQREILYGCIDVTYAPVSVKHLRIQ

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