Gene
| Gene Model ID | pfu_aug1.0_177.1_50692 |
|---|---|
| Locus | scaffold177.1 : 48176 ... 87364 : + |
| To GenomeBrowser | scaffold177.1:48176..87364 |
| Genes list of scaffold | scaffold177.1 |
| Synonym | pfu_aug2.0_1252.1_08284 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_177.1_50692.t1 | 1 | 1 | Plexin_cytopl | 556 | 750 | 4.7e-36 | 124.2 | 8.5e-40 | 6.3e-36 | 123.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_177.1_50692.t1 | gi|332023822|gb|EGI64046.1| | 5.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_177.1_50692.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_177.1_50692.t1 atgatatcgagaaccaacttttcattttggtgccgcttagaggatcgaacagaatcgcccttgaattttactggtccttt tggaacgtgtgctatagatggtcagaaggggcgaaatcattctgaagtaactgcaggaaggaaaacgttcactatccttg caaaggcaaaacatcccgaaaacaataccttcgtgactatcgcaacctcagactttgagatttacgactgttcttcatat accacgagaagtatcagagaggtccagtctgttaataacgtatatacatgttatgatgactctgatgttggcgtaaaata tgaattgttggttgtgttagcggctaccttgtacactgtatccaaactttctagccgggaggaaattcgacctgaaatcg gtaaacatgactacgcgcagcgggataaaatggagtgtccttatgtcataggaaaccagaaattgaaaattgctaacaat aagcttacacaacttgtgattcacgctaggaatttagttaaaatggcagcttctggtgctataacgaaccttcttgttac agttatatctcgtcgcgagaacggcgaagaagtcgtaacatatacgttgttaaacttcaagaaaagtcaaacttacgtag aagcatactcgtgtgcgccattgcttcaaagatttgcgtctaggcgcacggatgattgcagttcttgtaaatacctctca agacagggatatgaatgtgactggtgtacatcatcatcgtcatgtaccagtggcgaatgttcaaacagaactgtaccttg tggaccacccgagttaattaatacactgggcagtatcgaacttttggaaccaagaatcggaataaagtctggaaatgcca tagtaagttttaaaagccagttcatcgatcaacgagctaaaatcaaattcattggagaaaagtcagtttacgactgtgct cagctaataagctctgcaggaaaagtaaagtgccttagtcctaaagttgaagatgacgaaacggggatgtataacatcac tgtgatgtatgatggagtcaacgttacgctggaagatacgtatgaaataatatcggatcctgaaataataccaccctcag agctcaagaccataagatcaggcggtttagaactgaaaatatcagcaagaggtccttttgattttggaattgtgtccgaa aaacatttgagagtggggaatgctagcaaaccatgcatcgttaaaggaaatgcaaagaatgccgttttttgtacctatcc accttttacaccaagtagaagaaatagaagaagaagaaagcgagatgttggggctgagcaagcccgtttagaacttgacg gtttgagtacgttcctaggatttgttagatatgtggaggatcctaaattcaagaacttgactgcagtattcgagtacgac ccgacaatagataaaatgctggaactttacggcgaaagtctgacaactgtaacatcaaaccctgaacattataatgtata cattggatctggattatgccatagtgagaaccttacgtcatctttattgacttgcaaacctccagagaaagaaccaagtc catggagaggggacaagaaactaattataagagatgaagtagtggaggaatctacacctgatgacacgaacatcacagcg cgccatcttaaagaggagaaaggcatgcatatcacaagtcttatgcacaccaagctaattctacaagagtacatacggac attactggatcagattctagacgaaaacatacagtctatagtgcattatgtctttggtacactgaacacaatagctgaaa gtaaaggtgtggacccagacgtactacagtgctggaaatcagagagttacgccatacgtatctgggcttccttagtggct acccctgatgtcttgtttgacgtggaccgtcctaaacacatagaaccttcattggacagcattaggcaactcatcatcga ctgcttccacaatacaaaaatcaccaaggactcctcgcttcaaaagttattattcgcaacggaagttccagaataccaga agaagatagacatcttttacaagaggctgtcacagttagagtgtataggagagggacaatttgccaacgaaatgaccaaa ctctcaaacatgcagcagtccagtttcgactttaagaaactgcccgtcctattgaaaatatacaagtttatacaatcata cattgaagatgttctggaagatttggacgacgacgaggacgccaagagtctggatttacgtgctaaactagaaaccgtca ttgaacaaatggaccaagacgagtaa |
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Protein
| Protein ID | pfu_aug1.0_177.1_50692.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_177.1_50692.t1 MISRTNFSFWCRLEDRTESPLNFTGPFGTCAIDGQKGRNHSEVTAGRKTFTILAKAKHPENNTFVTIATSDFEIYDCSSY TTRSIREVQSVNNVYTCYDDSDVGVKYELLVVLAATLYTVSKLSSREEIRPEIGKHDYAQRDKMECPYVIGNQKLKIANN KLTQLVIHARNLVKMAASGAITNLLVTVISRRENGEEVVTYTLLNFKKSQTYVEAYSCAPLLQRFASRRTDDCSSCKYLS RQGYECDWCTSSSSCTSGECSNRTVPCGPPELINTLGSIELLEPRIGIKSGNAIVSFKSQFIDQRAKIKFIGEKSVYDCA QLISSAGKVKCLSPKVEDDETGMYNITVMYDGVNVTLEDTYEIISDPEIIPPSELKTIRSGGLELKISARGPFDFGIVSE KHLRVGNASKPCIVKGNAKNAVFCTYPPFTPSRRNRRRRKRDVGAEQARLELDGLSTFLGFVRYVEDPKFKNLTAVFEYD PTIDKMLELYGESLTTVTSNPEHYNVYIGSGLCHSENLTSSLLTCKPPEKEPSPWRGDKKLIIRDEVVEESTPDDTNITA RHLKEEKGMHITSLMHTKLILQEYIRTLLDQILDENIQSIVHYVFGTLNTIAESKGVDPDVLQCWKSESYAIRIWASLVA TPDVLFDVDRPKHIEPSLDSIRQLIIDCFHNTKITKDSSLQKLLFATEVPEYQKKIDIFYKRLSQLECIGEGQFANEMTK LSNMQQSSFDFKKLPVLLKIYKFIQSYIEDVLEDLDDDEDAKSLDLRAKLETVIEQMDQDE |
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