Gene
| Gene Model ID | pfu_aug1.0_17.1_14690 |
|---|---|
| Locus | scaffold17.1 : 236 ... 20778 : + |
| To GenomeBrowser | scaffold17.1:236..20778 |
| Genes list of scaffold | scaffold17.1 |
| Synonym | pfu_aug2.0_2425.1_18811 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17.1_14690.t1 | 1 | 1 | Adaptin_N | 4 | 341 | 0.0 | 310.7 | 0.0 | 0.0 | 310.1 |
| pfu_aug1.0_17.1_14690.t1 | 2 | 1 | Cnd1 | 4 | 98 | 3.0e-10 | 40.2 | 7.0e-11 | 1.0e-07 | 31.9 |
| pfu_aug1.0_17.1_14690.t1 | 4 | 1 | HEAT_2 | 5 | 29 | 1.1e-07 | 32.0 | 0.93 | 1400.0 | -0.4 |
| pfu_aug1.0_17.1_14690.t1 | 4 | 2 | HEAT_2 | 37 | 114 | 1.1e-07 | 32.0 | 0.11 | 170.0 | 2.5 |
| pfu_aug1.0_17.1_14690.t1 | 4 | 3 | HEAT_2 | 187 | 267 | 1.1e-07 | 32.0 | 3.7e-05 | 0.054 | 13.7 |
| pfu_aug1.0_17.1_14690.t1 | 2 | 2 | Cnd1 | 241 | 324 | 3.0e-10 | 40.2 | 0.01 | 15.0 | 5.3 |
| pfu_aug1.0_17.1_14690.t1 | 4 | 4 | HEAT_2 | 260 | 335 | 1.1e-07 | 32.0 | 2.5e-06 | 0.0037 | 17.5 |
| pfu_aug1.0_17.1_14690.t1 | 1 | 1 | Alpha_adaptinC2 | 373 | 473 | 1.1e-10 | 41.8 | 1.4e-13 | 2.1e-10 | 40.9 |
| pfu_aug1.0_17.1_14690.t1 | 1 | 1 | B2-adapt-app_C | 487 | 596 | 1.7e-29 | 101.9 | 4.0e-32 | 5.9e-29 | 100.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17.1_14690.t1 | gi|307206505|gb|EFN84531.1| | AP-1 complex subunit beta-1 [Harpegnathos saltator] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 2 |
| mantlePallium | 1 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_17.1_14690.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14690.t1 atgttagttaaagttgttgcaaatgctgttgctgccatatcagagatcttggaatcttcccccacggctcaacaggtgct ggaaatgaacgctagtacaattaacaaactcctgacagctcttaatgagtgtactgagtggggacaagtctttattctgg atgctatatcaaactacacaccaaaggatgacaaagaagctcagagtatctgtgagcgagtaacgccacggctagcccat gccaatgctgcagtggttctctctgctgtcaaagttataatgaagtttatggagatgctggacagttctgctgattacat tacaatgttagtgaagaagttagccccacccctagttacacttctctcagctgaaccagagattcaatacgtggcattac gcaacatcaacctggttgtacagaaaaggccagacatcttgaagaatgagatgaaggtattctttgtgaagtacaatgac ccaatatatgtaaagctggaaaaacttgacattatgatcagactgaccactcaggccaacattgctcaggtcctggctga acttaaagaatatgccaccgaggtggatgttgattttgtacgtaagtcagtgagagccatcggacgctgtgctatcaaag tagagcaggctgcggagagatgtgtgagcacgttactggaccttatacagaccaaagtcaactatgttgtacaggaggct attgttgttattaaggacatctttaggaaataccccaataagtatgagagcattatagccacattgtgtgagaatctaga cactctggatgaaccagaagccagagcctccatgatatggattattggggagtacgcagagagaatagacaatgctgatg aactcctagagagcttcctggaaggattccaagatgaaaatgcacaggtacagctacaacttctgtcggccattgtgaag ctgttcttaaagagacccacagacacccaggagctggtacaacaagtcctcagtctggccactcagttaggtggtccagc accaggaggcgacgcccttggtggattaggtgatatctttggtatgccagcatcacagtcatatgtgccaccccaggagg tgtggttaccagcaaataaagctaagggtatggaggtgacaggtacattttccaggaaacaaggtaatatctacatggag ttaacatttacaaacagagccatgcagccaatgtctggacttgctatacagtttaacaaaaacagctttggtttgatgcc ggcaaatccacttaatatccaaggagctgtactacccaatcagagtgccagctcatcactccaactaaatacaatgggcc ctgtacaaaggatggatcctctcacaagtttacaggtggctataaaaaacaacatagatgtattttactttagctctttg gtgccaatgcatgcattgtttgtagaagatggagaaatggataaaaagatattcttaggaacctggaaagacataccagc tcagaatgaagtacaatacgagataactaatgtacaacataatgcagatatggtatcccaaaagcttaaaaataacaacg tatttacgatagctcgacggaacgtggagggtcaggatatgatgtatcagtccctcaaactgaccaatggtatctgggtg ttagctgaacttaaaatacaacccaataatcctaacttcatgttgtcactaaaagctcgagccatggacatatatccagg aatccagcaggcgtacgatatgatcctccataactag |
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Protein
| Protein ID | pfu_aug1.0_17.1_14690.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14690.t1 MLVKVVANAVAAISEILESSPTAQQVLEMNASTINKLLTALNECTEWGQVFILDAISNYTPKDDKEAQSICERVTPRLAH ANAAVVLSAVKVIMKFMEMLDSSADYITMLVKKLAPPLVTLLSAEPEIQYVALRNINLVVQKRPDILKNEMKVFFVKYND PIYVKLEKLDIMIRLTTQANIAQVLAELKEYATEVDVDFVRKSVRAIGRCAIKVEQAAERCVSTLLDLIQTKVNYVVQEA IVVIKDIFRKYPNKYESIIATLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLEGFQDENAQVQLQLLSAIVK LFLKRPTDTQELVQQVLSLATQLGGPAPGGDALGGLGDIFGMPASQSYVPPQEVWLPANKAKGMEVTGTFSRKQGNIYME LTFTNRAMQPMSGLAIQFNKNSFGLMPANPLNIQGAVLPNQSASSSLQLNTMGPVQRMDPLTSLQVAIKNNIDVFYFSSL VPMHALFVEDGEMDKKIFLGTWKDIPAQNEVQYEITNVQHNADMVSQKLKNNNVFTIARRNVEGQDMMYQSLKLTNGIWV LAELKIQPNNPNFMLSLKARAMDIYPGIQQAYDMILHN |
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