Gene
| Gene Model ID | pfu_aug1.0_1692.1_37089 |
|---|---|
| Locus | scaffold1692.1 : 50846 ... 78860 : + |
| To GenomeBrowser | scaffold1692.1:50846..78860 |
| Genes list of scaffold | scaffold1692.1 |
| Synonym | pfu_aug2.0_9822.1_09740 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1692.1_37089.t1 | 2 | 1 | tRNA-synt_1e | 31 | 141 | 0.0 | 172.7 | 9.4e-32 | 7.0e-28 | 97.6 |
| pfu_aug1.0_1692.1_37089.t1 | 2 | 1 | tRNA-synt_1g | 53 | 96 | 2.7e-06 | 26.3 | 0.058 | 430.0 | -0.7 |
| pfu_aug1.0_1692.1_37089.t1 | 2 | 2 | tRNA-synt_1e | 146 | 211 | 0.0 | 172.7 | 2.1e-24 | 1.6e-20 | 73.4 |
| pfu_aug1.0_1692.1_37089.t1 | 2 | 2 | tRNA-synt_1g | 153 | 224 | 2.7e-06 | 26.3 | 1.8e-09 | 1.3e-05 | 24.0 |
Transcript
| Transcript ID | pfu_aug1.0_1692.1_37089.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1692.1_37089.t1 atggctgtacgaccttttccggtggtcagtgttggcagagagatcatgatgacgcaacgaaatcctgtcgataatgccat tcccagacatagaattaaggttctccctgcagatgtactgacaagggtcagtgaatacgtaccggagattgtggactacg tacagaaaatcatcgataatggatatgcatatgaatctcgtggctcagtgtatttcgacactgccaaatttgatgctgct cccaaccaccactacgccaagctggtaccagaggcgtacggtgacaaaaaggctctcaatgagggggaaggtgaactgag tgtatcagaggataggttagaagagaagagaagtactaatgattttgctctgtggaaagcatctaaaccaggtgaaccta gctgggactcaccctggggcaaggccttctatgagaatgaccattgggtgcggtacttcttacacactggacatttgacc atcgaaggctgcaagatgtccaagtccctcaaaaacttcatctccataaaagacgcactaggcaagcacaccccacgaca aattcggttcttatttttactgcatcagtggaaggacactctagattatggctcaaacagcatggaaatagccaccaagt acgagaaaatggtcaatgaattcttcttgaatgtaaaaagtctgttaaggaatactcccagtacagggatagaagctttc gagaaatggaataaggaagaagtggatctcaatgaaaggtttgcagagacaaagtctggtgtacatgaagcactctgtga taatgtaaacacaaggttagtgttacagaaattacaagacatgattgggtctacaaatatttacatgcagaggttcaaat ctgtgtcagggctcgaggcaggaagaccaaatagaatgcttctacaaaatattgcagattacattacaaaactgttcaag gtatttggtgcaatagagacttcagatgaagtaggctttccccagggtggggcaaaggccacaaacacagaggaaatagt catgccctacctagaggccttcgctgatttcagggaaaaagtcagaaaagcatccatggaacagaaagttattcctgttt taaagctatgtgatgaagtgagggacgaaaccctccccaacctcggggtcagattggaggacaccggaactccgcccaca atcaaacttgtcgacaaggaaactctactgaaggaaaaggctgaaaaacaaaggcaagaggaacagaagcggttggaaaa agaaagaaagaaaaaggaacagccggcaataaatatagctcggcaagatttttggccggattgcaaagcaattccggtct atggattgacaatgtccgtctgtccgtccgtccgtctgtccgtcagccgtcaacattttggttaa |
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Protein
| Protein ID | pfu_aug1.0_1692.1_37089.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1692.1_37089.t1 MAVRPFPVVSVGREIMMTQRNPVDNAIPRHRIKVLPADVLTRVSEYVPEIVDYVQKIIDNGYAYESRGSVYFDTAKFDAA PNHHYAKLVPEAYGDKKALNEGEGELSVSEDRLEEKRSTNDFALWKASKPGEPSWDSPWGKAFYENDHWVRYFLHTGHLT IEGCKMSKSLKNFISIKDALGKHTPRQIRFLFLLHQWKDTLDYGSNSMEIATKYEKMVNEFFLNVKSLLRNTPSTGIEAF EKWNKEEVDLNERFAETKSGVHEALCDNVNTRLVLQKLQDMIGSTNIYMQRFKSVSGLEAGRPNRMLLQNIADYITKLFK VFGAIETSDEVGFPQGGAKATNTEEIVMPYLEAFADFREKVRKASMEQKVIPVLKLCDEVRDETLPNLGVRLEDTGTPPT IKLVDKETLLKEKAEKQRQEEQKRLEKERKKKEQPAINIARQDFWPDCKAIPVYGLTMSVCPSVRLSVSRQHFG |
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