Gene
| Gene Model ID | pfu_aug1.0_16757.1_32732 |
|---|---|
| Locus | scaffold16757.1 : 94 ... 11964 : - |
| To GenomeBrowser | scaffold16757.1:94..11964 |
| Genes list of scaffold | scaffold16757.1 |
| Synonym | pfu_aug2.0_2734.1_15611 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16757.1_32732.t1 | 2 | 1 | EF-hand_1 | 2 | 28 | 3.7e-10 | 38.3 | 3.0e-12 | 7.3e-09 | 34.2 |
| pfu_aug1.0_16757.1_32732.t1 | 2 | 1 | EF-hand_6 | 2 | 29 | 7.8e-10 | 37.8 | 1.7e-12 | 4.3e-09 | 35.4 |
| pfu_aug1.0_16757.1_32732.t1 | 1 | 1 | EF-hand_7 | 2 | 47 | 3.5e-09 | 36.6 | 3.1e-12 | 7.6e-09 | 35.5 |
| pfu_aug1.0_16757.1_32732.t1 | 1 | 1 | EF-hand_5 | 2 | 25 | 8.1e-08 | 31.2 | 9.4e-11 | 2.3e-07 | 29.8 |
| pfu_aug1.0_16757.1_32732.t1 | 2 | 1 | EF-hand_8 | 4 | 26 | 9.4e-06 | 25.1 | 2.0e-05 | 0.05 | 13.2 |
| pfu_aug1.0_16757.1_32732.t1 | 2 | 2 | EF-hand_8 | 13 | 47 | 9.4e-06 | 25.1 | 7.4e-07 | 0.0018 | 17.8 |
| pfu_aug1.0_16757.1_32732.t1 | 2 | 2 | EF-hand_6 | 33 | 42 | 7.8e-10 | 37.8 | 0.75 | 1900.0 | -0.8 |
| pfu_aug1.0_16757.1_32732.t1 | 2 | 2 | EF-hand_1 | 36 | 47 | 3.7e-10 | 38.3 | 0.019 | 46.0 | 3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16757.1_32732.t1 | gi|3800849|gb|AAC68891.1| | VU91C calmodulin [synthetic construct] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_16757.1_32732.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16757.1_32732.t1 aatataaagaagtctttagtatgtttgataaggacggggatggaacgataacagctaaggagctgggtaccgtgatgagg tcactaggtcgatatcccacagaggcagagctacaggatatgatcaatgaagtcgatatagacgtccatagtacttcacc tggacgtgaaactcgcgtttcagcggaatgcaacatatgtgacttacgaaattacggttaccatggattttgtgaaaaat taaaaagtgaaatatcttcatcaaataacatgtccgctaagacaatgaatcgtgacgatcaaggcgacttggtagatgca aatgaatattccttctcaaaaattttatcggcgacaagacatggttcaaaatttggaccaaatccacgcatgtga |
|
Protein
| Protein ID | pfu_aug1.0_16757.1_32732.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16757.1_32732.t1 YKEVFSMFDKDGDGTITAKELGTVMRSLGRYPTEAELQDMINEVDIDVHSTSPGRETRVSAECNICDLRNYGYHGFCEKL KSEISSSNNMSAKTMNRDDQGDLVDANEYSFSKILSATRHGSKFGPNPRM |
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