Gene
| Gene Model ID | pfu_aug1.0_1637.1_58609 |
|---|---|
| Locus | scaffold1637.1 : 31349 ... 44525 : - |
| To GenomeBrowser | scaffold1637.1:31349..44525 |
| Genes list of scaffold | scaffold1637.1 |
| Synonym | pfu_aug2.0_459.1_30782 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1637.1_58609.t1 | 1 | 1 | Bile_Hydr_Trans | 35 | 171 | 2.6e-32 | 111.1 | 5.9e-36 | 4.4e-32 | 110.4 |
| pfu_aug1.0_1637.1_58609.t1 | 1 | 1 | BAAT_C | 228 | 297 | 2.0e-12 | 47.2 | 4.1e-16 | 3.0e-12 | 46.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1637.1_58609.t1 | gi|260781253|ref|XP_002585734.1| | hypothetical protein BRAFLDRAFT_72249 [Branchiostoma floridae] | 1.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1637.1_58609.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1637.1_58609.t1 atgaaagtgatcatacgaaatacatctaacaccacaatgcattcagatgctgccagtctacttgccataccccatatttc tgtaacaccagagaatgctctgatagatgataaactgtatatacgtgtaagtggcctgcaaaaatatcagaatgtcactc ttttgaacaaagtggcagataatggaatcagatttgcatcgagcggctgctttagagctaataatgaagggattgtggat gtttctcaggatgaatgtttacagggaacatataagggtaaagatgctatggggttgttctggagtctaaaaccagagcc tgggtacgagaacaagagattgttgaaagacgatgtctctactcctttggtgttccatgtgttagtatatgatggaatgt attcatgggaagaactacataagaaaagttctacattggaacccctgaattcaacagaaattaatcgctggtacaagtct ccagatgtaaaaaggatcgatatacatgaaggaaatctcaggggtgcattgtttattccaaaaggtangatgtccattat ccttattttctggtatgacagtcagtgctcattaaattgcatctcccacaaacaaagtgtggatttgaaaagactggaaa agtcagaagaggggttggtaatgaagttctgttatgttcatcatgaagagtatattatcaaggcttgggaatcagatgcc aagtatctatgtttagtgggcgaggatgatcagtgtttagacagctcatacatggattattggtattctaaatggccgtc agatcagagacataaagtagagtatataaaatatcctgacacggggcacctggtggaaccaccttattcaccacttcaca ggaccaccacaatacgaactccatttagtaagtgttag |
|
Protein
| Protein ID | pfu_aug1.0_1637.1_58609.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1637.1_58609.t1 MKVIIRNTSNTTMHSDAASLLAIPHISVTPENALIDDKLYIRVSGLQKYQNVTLLNKVADNGIRFASSGCFRANNEGIVD VSQDECLQGTYKGKDAMGLFWSLKPEPGYENKRLLKDDVSTPLVFHVLVYDGMYSWEELHKKSSTLEPLNSTEINRWYKS PDVKRIDIHEGNLRGALFIPKGXMSIILIFWYDSQCSLNCISHKQSVDLKRLEKSEEGLVMKFCYVHHEEYIIKAWESDA KYLCLVGEDDQCLDSSYMDYWYSKWPSDQRHKVEYIKYPDTGHLVEPPYSPLHRTTTIRTPFSKC |
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