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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1585.1_29777
Locus scaffold1585.1 : 44956 ... 63757 : +
To GenomeBrowser scaffold1585.1:44956..63757
Genes list of scaffold scaffold1585.1
Synonym pfu_aug2.0_170.1_00361

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1585.1_29777.t1 gi|350399357|ref|XP_003485498.1| 3.0e-19

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_1585.1_29777.t1
Definition-
>pfu_aug1.0_1585.1_29777.t1
atgcactttaaggaattgagaagcagggaagaagagctaacaaaagccgctttacaacagaagaaagcagaagaaatttt
atacaaaagggaacaagaactgaaggaaagagagatagagctggtggaaagggagttaaatataatgatcctacagcaaa
tcatgggcaatccaaagccaaggactcgacggggaaagtttaaaaagagtcgtttaaaactgttgaagtccggaggtaca
tccatcagtgaaccttcagatggtgatgagaatgaatttcctgttgatatcatggatgatcagaggataagaggatcagg
attttcgaatggtggagaaacgataaggaggaaaacggaaaataaaacggacaatgctttgttgaatattgctgcaatgt
tagtgggattaagcatgggttgtgatattcgggggttggtcactaacaaggacgataaaatgtcaaaacgcaagtccaag
gagtctcatataggcaatcgcagggatgcatacaatgctgctgtgcgagattcattcatcgagtctgatgaaatgctatc
ataccgctttaattccccctcagggtacctacataatacgtatcatgggtatcagactaggcatcgacctagcctcaact
ttgaagatgtgccaattagatttaccgaacaaaatgaccaatattccacattgacttctacaagtacattgacttctcaa
tccacagtgaaaaggaggtcatattatgattccagtgatgcaagtacaataacatccccctcgccaattcatacaaattt
gcaaagacagtcttcagatagtagtaattacgaaactccgcggacttccaaaaatcatcggcattctgtgacgtttgaag
acgagtacaaacctgattacagggactacaagtcttcttataacactcatcgacgatcaccatcaaatacctcaaatacc
aaccctgattgtgacaccagggggcagcaccagcaaggggagtttaccaggtcttcctcaggactatggaatgacaatgt
gcggtcttccagcccctggagtgagtcttcctctcaaaactcgagcccctggcatgaaagtaaaaaagactatcacagta
gacagcaggaggattctgaacctcccccacccatacctcctcgtaggaggaacctcaacttacagaatggtgatgctcat
gctgagaggccaaccacaattctcaatataggaccaagaaatcgtccccgctacgctgtacctgctcccattcccacacc
tacaaacaaacacgaatctcctcagtgggtagataaaaacgacggcaatgttgagacgccctattattcaacacggtcaa
gcctctcccctggccatacaccaccacacatccagcatcagaccaccctgctggacattgatgtggatggacaaagcaat
gatagcacacaacctctactcaggcatactcccaataggttctttaatgaatttgagaatgatttgctgtattga

Protein
Protein IDpfu_aug1.0_1585.1_29777.t1
Definition-
>pfu_aug1.0_1585.1_29777.t1
MHFKELRSREEELTKAALQQKKAEEILYKREQELKEREIELVERELNIMILQQIMGNPKPRTRRGKFKKSRLKLLKSGGT
SISEPSDGDENEFPVDIMDDQRIRGSGFSNGGETIRRKTENKTDNALLNIAAMLVGLSMGCDIRGLVTNKDDKMSKRKSK
ESHIGNRRDAYNAAVRDSFIESDEMLSYRFNSPSGYLHNTYHGYQTRHRPSLNFEDVPIRFTEQNDQYSTLTSTSTLTSQ
STVKRRSYYDSSDASTITSPSPIHTNLQRQSSDSSNYETPRTSKNHRHSVTFEDEYKPDYRDYKSSYNTHRRSPSNTSNT
NPDCDTRGQHQQGEFTRSSSGLWNDNVRSSSPWSESSSQNSSPWHESKKDYHSRQQEDSEPPPPIPPRRRNLNLQNGDAH
AERPTTILNIGPRNRPRYAVPAPIPTPTNKHESPQWVDKNDGNVETPYYSTRSSLSPGHTPPHIQHQTTLLDIDVDGQSN
DSTQPLLRHTPNRFFNEFENDLLY

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