Gene
| Gene Model ID | pfu_aug1.0_15828.1_32597 |
|---|---|
| Locus | scaffold15828.1 : 1 ... 5643 : + |
| To GenomeBrowser | scaffold15828.1:1..5643 |
| Genes list of scaffold | scaffold15828.1 |
| Synonym | pfu_aug2.0_1732.1_08544 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15828.1_32597.t1 | 1 | 1 | tRNA_int_endo | 373 | 400 | 1.0e-07 | 31.6 | 3.0e-11 | 2.2e-07 | 30.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15828.1_32597.t1 | gi|115681563|ref|XP_784204.2| | 3.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15828.1_32597.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15828.1_32597.t1 ctatctccgtcgtctgaaatggtctaacactgaggggacggagggtgatgaatatgacagctcacaggaaattatagtgg aaagagctgatgagctggcaagtaaagatctacatagagatgataatatggagaggaatgtagaggaagaaaaatctaca aataagtctactatgtcagaggaagaaatggaagaaagtgattggccaggaggaggtaactcagcaaaaaaaagtgtagt ggatgattggggtactggtacgggagatacagacttctggggagaaaagtcagctgttgacagctgggaaaaagatgagg gagatgtagatttctggaatagtactgagactaaatctaaaactgatcttaaagaagaagacatgtcaattactgaaagc cctcatgtggaaagtcaaaaatatacagaaaaaccatcccatggaatcacaaaaggtagtaatttacaaaaagaaaataa catggaagtagacaaggatctgggtttggatagcactgaattaaatagtcgtaaagaggaatttctcaatattaaaggtg caaatgggaacaaatcagagaattttaactccgtatgctttcaaaaaagtactgccaattcaaagacaaatatgtcatct aatacagaaaatgccaaggatgcaacacgtaacataaaagacgaatatgaggagaagagtaacgcaagtgagagtaacgt agacacgataaaccagatcaatgagaagaaaccctcaagtttaaaagacaatgaatctgattggtgcagatcagaagaaa ataacgatcactgtaatgagagaagttctgatagaacatatgatccaagaagcttagaggaggaggagtgtggttgtctg ctggtagtagatgattctgatagtgagtctgaaaccaaaaagaggaaattttcagaattaccatggaaaccagttaagaa gatagacccgtatttcatgaaggaaaacttacatttaagctatgaggaggcatttttcctggcttatggtttgggtagtc tgattatgtatggagaaaaccaggagaaattattattaagtggaatgtggaaaatcttttgtcaaagaaggaagaacttt gtacccaagtatatagcctaccattactacagaagtaaaggatgggtacctaaatctggactgaaatttggatctgattt tggtaagtgtaacgacacctttataacgacactgttcctgcgggatgttatatatacatgtgtttacaccattctgcaca caacagtattttccaatgtcgtgcacgacttcatctggaaaagtttctctgctgtcagcggaactacttacctgcaggaa tcttgcagaaactttcaggaatggtga |
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Protein
| Protein ID | pfu_aug1.0_15828.1_32597.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15828.1_32597.t1 YLRRLKWSNTEGTEGDEYDSSQEIIVERADELASKDLHRDDNMERNVEEEKSTNKSTMSEEEMEESDWPGGGNSAKKSVV DDWGTGTGDTDFWGEKSAVDSWEKDEGDVDFWNSTETKSKTDLKEEDMSITESPHVESQKYTEKPSHGITKGSNLQKENN MEVDKDLGLDSTELNSRKEEFLNIKGANGNKSENFNSVCFQKSTANSKTNMSSNTENAKDATRNIKDEYEEKSNASESNV DTINQINEKKPSSLKDNESDWCRSEENNDHCNERSSDRTYDPRSLEEEECGCLLVVDDSDSESETKKRKFSELPWKPVKK IDPYFMKENLHLSYEEAFFLAYGLGSLIMYGENQEKLLLSGMWKIFCQRRKNFVPKYIAYHYYRSKGWVPKSGLKFGSDF GKCNDTFITTLFLRDVIYTCVYTILHTTVFSNVVHDFIWKSFSAVSGTTYLQESCRNFQEW |
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