Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1564.1_51336
Locus scaffold1564.1 : 48314 ... 60247 : -
To GenomeBrowser scaffold1564.1:48314..60247
Genes list of scaffold scaffold1564.1
Synonym pfu_aug2.0_3.1_10061

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_1564.1_51336.t1
Definition-
>pfu_aug1.0_1564.1_51336.t1
ggtcaaaccaggttgttctagtcagggaacttgatgaggggagagaggaatgtcaccatagatgtgttaacaaggctatg
tgcggacatgaatgctgtaaacatggtattgtaaagaaggcagtccccacaaagtccctggttaggactccatctgtcaa
cagagccaagtttatggacagctacgtctctgacttaaagaacaagatacaacctatgcctgaaacaccacgaatcagca
ctaaagtaaatactatgagagagaatgtcatagatctaacaaagtttgcatactgccccagcgaaagaatgtcatggcaa
ataagtgatgaaagacagccaaaaacaacatcagcattagatatgttctattccaacagattgaaccagaattctgttaa
caaatcagaagttagagcccctataactccacataataccaccacaggaaggagtacagacaacagctggataaaactag
acttgtttatgagaggaagagataggagtcctgtagaattatctgatgaagaagaaaatggaccaactgtgtacagtgat
aggtatgaaggccatgactatgaggagaatggttatgaaggagatgatataggagattttgatcttcagtccagcttgtt
cccaatgaggcagtcaaatcttggatacagaggtacatcagcacaaaatgtacacagtgatcaaactgctgctagagatg
ccgattgtctgtctgactgggacaatagcttgccaaaattagttagaggaccaaataaaagccataggtatggtaaagta
gtagcatggagtaactcccaggaagctgtaggtgatgaagttacaggggactggagtggtagtgacaatgatcttatcac
tgcagagcaacaattgtctcagtcttataattctggtacccaggatggacatagtgaacctaccataaacacatcagaac
atcagtttccacagtcttacaattctagaaccctagaaggacaatgtatacttgtccaaaacacagcaaaacagccacag
gtcaatgtttcaaggtcagagaggcagcaaacaaaaccttcaaatacagacaattcagttcataagagttctggatttac
aaatagttctgacacttttatgactgattacaagtggaataataactgctgtagtaatatcaatggaaacttacagaagc
agcagaactatccacaagttcctctcggctccagtgtcaaatcagcaagttctgtttgctctatgagtgagtcaagaacc
aaagacactgcttatatggcttcactctcaaataacagaccagaacatggagattgcaaaggctctctaagttccaagaa
tacagatgcaccatgtgtctttagcaagaattgtggatttcaagcaaatatagactgttgtcatgtcaatgagatagaga
accaggattctttgtataataatgaccatgttgaaccagctgctatgaagcagtcaaacatcatgcagtatgggagactg
gtaaagaagcctgtctacaaggcaaacattaactctccagtatccagtagaagtgtaaagagagggtcttttacatcctt
cttcactgactgttttactggagcagatgaggtccctaatgacagtgctgtaggggatgacagattggacacatttgata
gcatttttgatggaatattctaa

Protein
Protein IDpfu_aug1.0_1564.1_51336.t1
Definition-
>pfu_aug1.0_1564.1_51336.t1
SNQVVLVRELDEGREECHHRCVNKAMCGHECCKHGIVKKAVPTKSLVRTPSVNRAKFMDSYVSDLKNKIQPMPETPRIST
KVNTMRENVIDLTKFAYCPSERMSWQISDERQPKTTSALDMFYSNRLNQNSVNKSEVRAPITPHNTTTGRSTDNSWIKLD
LFMRGRDRSPVELSDEEENGPTVYSDRYEGHDYEENGYEGDDIGDFDLQSSLFPMRQSNLGYRGTSAQNVHSDQTAARDA
DCLSDWDNSLPKLVRGPNKSHRYGKVVAWSNSQEAVGDEVTGDWSGSDNDLITAEQQLSQSYNSGTQDGHSEPTINTSEH
QFPQSYNSRTLEGQCILVQNTAKQPQVNVSRSERQQTKPSNTDNSVHKSSGFTNSSDTFMTDYKWNNNCCSNINGNLQKQ
QNYPQVPLGSSVKSASSVCSMSESRTKDTAYMASLSNNRPEHGDCKGSLSSKNTDAPCVFSKNCGFQANIDCCHVNEIEN
QDSLYNNDHVEPAAMKQSNIMQYGRLVKKPVYKANINSPVSSRSVKRGSFTSFFTDCFTGADEVPNDSAVGDDRLDTFDS
IFDGIF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495