Gene
| Gene Model ID | pfu_aug1.0_1549.1_44058 |
|---|---|
| Locus | scaffold1549.1 : 676 ... 6314 : + |
| To GenomeBrowser | scaffold1549.1:676..6314 |
| Genes list of scaffold | scaffold1549.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1549.1_44058.t1 | 3 | 1 | Cadherin | 21 | 103 | 4.3e-30 | 103.8 | 2.3e-13 | 1.7e-09 | 37.7 |
| pfu_aug1.0_1549.1_44058.t1 | 3 | 2 | Cadherin | 124 | 210 | 4.3e-30 | 103.8 | 9.3e-17 | 6.9e-13 | 48.6 |
| pfu_aug1.0_1549.1_44058.t1 | 3 | 3 | Cadherin | 239 | 275 | 4.3e-30 | 103.8 | 1.9e-06 | 0.014 | 15.6 |
Transcript
| Transcript ID | pfu_aug1.0_1549.1_44058.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1549.1_44058.t1 atggatacatgtggaaacagcaacacttcaacattaacagtatgggtatacaaagagagttcctttgaattagatgaaaa ccagccagttggaaccaatgtaggacagcttattcaaccagatagcttaactgtcaactacacaatcgcaggaagtgtct cagacttcgcagtagacgagttgaccggcttgctttccactcttgttgaactggactacgagtcaacacccctgtataac cttcaagtagaaattgcgttttcatctcctacctttactgcaacaaccaatgttaccatcagtgtattgaacttaaacga atttgatcctcagttcgataactcaactttgagtggttttgtcatcaaaacggcttcaataggaacttccgttttacaaa taagcgcgtttgacgttgatacgaatataaattcaacatgcaattacacgatgcttgaacctagtaacaacaatgcgact gcatattttgatctggacctcgtcaccggtgtacttacagttaaggctggtttagaccgcgaaacaataaaccattttga attcgaagtcgaggctctggagggaggttatccggcaaggagttcaaacacaacgatcagcgtgagaatttgggattata atgatttcaacccggtgatgtcaagttctttctatgacggtgcgacaagtaacagtgacttttgcgatgatgcgattgtt acgatattggcaactgacaatgatatcaataaaaatgcccggatgtcgtactatctagtccaaagtgacgacagttacct gttccgaatgaacgagacgacaggttag |
|
Protein
| Protein ID | pfu_aug1.0_1549.1_44058.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1549.1_44058.t1 MDTCGNSNTSTLTVWVYKESSFELDENQPVGTNVGQLIQPDSLTVNYTIAGSVSDFAVDELTGLLSTLVELDYESTPLYN LQVEIAFSSPTFTATTNVTISVLNLNEFDPQFDNSTLSGFVIKTASIGTSVLQISAFDVDTNINSTCNYTMLEPSNNNAT AYFDLDLVTGVLTVKAGLDRETINHFEFEVEALEGGYPARSSNTTISVRIWDYNDFNPVMSSSFYDGATSNSDFCDDAIV TILATDNDINKNARMSYYLVQSDDSYLFRMNETTG |
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