Gene
| Gene Model ID | pfu_aug1.0_15146.1_10782 |
|---|---|
| Locus | scaffold15146.1 : 1 ... 11925 : - |
| To GenomeBrowser | scaffold15146.1:1..11925 |
| Genes list of scaffold | scaffold15146.1 |
| Synonym | pfu_aug2.0_485.1_17475 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15146.1_10782.t1 | 3 | 1 | AAA_5 | 561 | 629 | 7.5e-10 | 38.6 | 7.5e-09 | 9.3e-06 | 25.4 |
| pfu_aug1.0_15146.1_10782.t1 | 2 | 1 | AAA_22 | 561 | 583 | 5.4e-06 | 26.5 | 2.0e-05 | 0.024 | 14.7 |
| pfu_aug1.0_15146.1_10782.t1 | 3 | 1 | AAA | 562 | 627 | 1.0e-06 | 28.9 | 7.0e-06 | 0.0087 | 16.2 |
| pfu_aug1.0_15146.1_10782.t1 | 3 | 2 | AAA_5 | 873 | 894 | 7.5e-10 | 38.6 | 0.0023 | 2.8 | 7.6 |
| pfu_aug1.0_15146.1_10782.t1 | 3 | 2 | AAA | 873 | 936 | 1.0e-06 | 28.9 | 0.0034 | 4.2 | 7.5 |
| pfu_aug1.0_15146.1_10782.t1 | 2 | 2 | AAA_22 | 873 | 938 | 5.4e-06 | 26.5 | 0.0088 | 11.0 | 6.1 |
| pfu_aug1.0_15146.1_10782.t1 | 3 | 3 | AAA_5 | 1110 | 1153 | 7.5e-10 | 38.6 | 0.67 | 830.0 | -0.4 |
| pfu_aug1.0_15146.1_10782.t1 | 3 | 3 | AAA | 1686 | 1719 | 1.0e-06 | 28.9 | 0.51 | 630.0 | 0.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15146.1_10782.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15146.1_10782.t1 atgttcgtctttcgttcaaaaaataacatatgcgaagacgtaagcgaagcacttttgatactgacagaagtagctcaaac tgattcaaatgaggttgcactcttgaaggcaactgaatggaaactgttctgggaaactgttctcgaaactgaaaccaaat ctgctccttcacttgaaagttatgcctttcgaaaagtgttaaagagtttaaacgaacttccagagaggtcggaacgcttt gaatatacctactatctgtacaatgaattgaatcccgaaaagatcaaagttttgaatgatttgatcagaaagcaaggaac agttaattacgacattttggaaaacttaaatatcggaagacgccatgctgaaagtgtaatggctgatttaatgctatcaa aaaccgttcttttaaggataatatatcgcataagtgacgacaaaatgaggtccgctgcagaagctttgctaacgcagatt aaaaagatgaagacattccttactgatggcaaagaatacatcagatattttttagaaagtactttcctctatggaaatgc agatgggatagtgtcattgattaaaagactacatttcattactcagtcaggtaaatcagaattcatcaaaaggaaagcac accagaagaacctgaagattagacatatccttttgacaggaaatctctctaaagataaagtaatatcggatttgagggat ttagtgcttaatgaaaatgatgttctacatatagatatcggagatgtttacaacgtagaaattgtcgacagcttggtttt tcaaattgttatcttacgatatctctcttctttgaaatgtacaatttcgatacctgctaatcatatctatattgaggttg ctaatacatttagggaaagattgcgaaaaaagatacccttcactgtgatgtttaggaacgaagtattgcattgggaaaat tttgacgactttcgaatctccgcagaaatgttcagccctgtccaggttgtctgcgcttatctacaacactatagtgacct tgactcaagagatgtacaactacacgagagaaggttcaccgatgaggaatgcagaaaactactgcaaaataaatgcagaa tcggagacagaccatctttctatacgataaacacattcctatgtgttcttggtgagcaactcaaaaagttgtccgctagt attttctttcgtcaagaaaatttaaaattaatgagcaaatctaggtccgaaggtgtcaaaagaaaactttttgatgcaat ttacagtatggctattgatattgcacagagaaatatcatgggatacaacaacgattctgagcaggaagatatactgacag aacaatccggtcgtcagatacattggggagatacgaatcacatgctgattgtgtttaacaactcaaacatagaaacagta tctgcattattccaagggttagatgatgtagcacaagaaataagagatctcttcaaatatcaattaggaaatgaattggt agagttacatcgattacaacaatgtgaattacaaaacagaatcgaaaaaataatccggacgaaagataccttagccgaga cggatccagagtatgtccttacagcagataatatccttaaaatgacactaatatcacagaaaattgattcaaatatacca atagttattatgggagaaactggttgcggtaaaacgtccctgctgcgatatctcgcaagcttgagggatatgtgtataaa cgttttcagcattcatgctggttggagttacgagaaaatcatacaaaacattgaatcggtcaatgaaaaatgtatgaacg aactggaaagagaatttctattatttctcgatgaaataaatacaagtgaacatgtaggacttctgtgcgatattgtgttg catcatcgaataccgaataaaacacttgctccaaatattatattggcagccgcttgtaatccttacaaaataccctctat cgaaggtcaaagtccaggcttaaagtatcccgacgagggagaagtccgtgggctgttgtataacgtatacgcccttccgg aagtaatacttgattttgtttgggattttggtagtttacagaagaacgatgagtacaagtacatagaaagaatggttcta aattctcttggagactttaaaatggatttgaaaatagtaactgctcttctggcgagatctcaagatcacatgagaaattc taaacaatgtgtaagcctgcgagacatcaaccgttgtactgctttaacgaaatggtttcaaaatacctacctaccatcaa aaagagaagatgatatatcctcagattctttcatgaaagcagtattgttatctttatgcctatgttatcatgcacggctt tcaacaacacgagaaaggaaggaattgagagaggatattgcaaatctgatgaaggatttcaccatgtattcggatgaaga taaaatacaaaatatgtggacgacagagcaaacttatgtgctcaataatatgcagattggaggggatgtagccaagaaca aagttttgaaagagaatgtgtttgctttatttgtttgtgtgatgaatagaatacctatatgccttataggagagcccggt tgtagcaaatcactatcagttcaacttttgagatctaatttgcgaggaggcgattcaccgagtgcttttcttagaaaatt tccacaaacatattttatttcattccagggatctgagtcgtcatcctctgagggaatcgaagatgttttccgaatcgcaa atgagtatcagatcgctagtcataanatttcaaaatgcaacgcagatttgcatcaaaccgctatagcaatttaccaaaat attgctgcgttggaggcgttgtgtggagaggaagaggatttaataaagaatctagttcaaagccatttcaaatacaccaa taatatttttcctcgtggattccatggtattagagacttttacgggcttataaagttcataagtaatgaaaagaaaagaa aagcaagtaccttcagcaagacacaatgggacattgttgttaaaaaaggtgttgccagaaactacggtggcttagcaaag gaaaatgaaaatgaccacgcttttcaagctttcttcgcagaaaactcagaatgtcctgaattgcaaaacattataatgga caatttggaagacagtttctgcaggaatttgatgctttttgctgaaactgacgctgtgatttggacaattcaaaatatgc tagacaagaataagaagcaatatgaaatcattataggtagcaggtttgatggtgatcagggagataattatcactatcgc gtgttgagccgtattatcgcctgtatggagcaaggccgaattctcattttgaaagatttagatagaatatatggcagttt atatgacatgttgaatcagaagtacacaaaaattggaaattcgaatcattgtagagtagcccttggtgctcatagtaatc cactttgctgcattagtgaaacattcaagtgtgtagttgtaacacatccaagttttgcaaacaatgggaaaaatgtgcct tttttgggtaggtttgaaaaacaaaattttgaattggatgacattgtacatcatcatctaaaaaaatctgtcgacgaaat gaacgaaattttgaaaaggatgcaagataatgaaacttattcccgacaaatggaagaatttcatctgacaccaatctatt caacgcgtttgctattaacattaattggatcgatgcaagacgaagagagagaacacgagtgtttgaaaaaaaagtgttac acgaagctcgcgaaagtgctaaatgcagacggtgtcctgaggatcttgaactcgtcagttgaaggtacagaaagaatgat tatggagaacatcaaaagtatttatttcagtttgccgattcataatggtctggcttttttcattgataaggagatagaaa gtgttagcttaccgtctgaaacaaatcgagaagaaacagataatttcaatgaaatgaaagcagaaatcagcactgaaata aattcctcaggcgtgattgaacatgataatcaagctttattttcttctgattcttcattagaattcgctgcgtgtgccaa gatgaatcgacttataacagtttttaccaacagtgacatacgagaagaagaatatataaatgagctgacatatagttcat acacgtcttttagaattaaagatattacttctgaaaaatacataatttcgaagctgaagaaattctggagcgacaaaagt caaacaagccattgtctaatcatagagtgtgatcaaagaactgatatggaacacctattgcttattcaaagcaagattga atcataccgtaaacagtacgtacaaaattttttccaacaaattcacagaccaaagcatgtgattttaataattttcaaag acaaaaggaaggcaaaatctgcttttagaacttgcaactttatgtcaagctgggaaacattttcgattgacagcctccgc aaacctaatatttgtctaacagatgcatattcgatgagagtatcagacttattgagaaaccataagacgaacatgtttga cgtcgatcaacttttcttggcttttacagcacttgattacaaatattcggaacaacgatgcattgaaactatcaaaaaga ttatcgttaccctttcgacacaagactctttgttagatccccttatttcaagagtgctacatttctttgaacgcgaggag aatattggaagctggttggccaatatagcgtacgatagatatattttgagtcaagaatctaccgtatctggagcgattga ggtatatttacgatataaggtgcgatgccttctcgccgaagttcttcaaattgttgatgatgggttcatgcttgatgaga tcatcagaagacgttcagatgaagacttcataaaaacgtggacctctctcacccgaaatcctgaagttgtcaaattagca ggttccgtgagaaatgtaatgccaaagtcattaccgatatcattaacagaggttcaaataaaactgcccttctcaataat tttcattgaaagaatggataaattattcgaatatttcctggaatcgactcaccattatgaaactgatacaaaaacaaagg aggagagggaaacttgtcagacatctcacaatatgtatagcctcgctaaaactttcgtatttgagagagcaaagagaatt cttgagcccttaaaacact |
|
Protein
| Protein ID | pfu_aug1.0_15146.1_10782.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15146.1_10782.t1 MFVFRSKNNICEDVSEALLILTEVAQTDSNEVALLKATEWKLFWETVLETETKSAPSLESYAFRKVLKSLNELPERSERF EYTYYLYNELNPEKIKVLNDLIRKQGTVNYDILENLNIGRRHAESVMADLMLSKTVLLRIIYRISDDKMRSAAEALLTQI KKMKTFLTDGKEYIRYFLESTFLYGNADGIVSLIKRLHFITQSGKSEFIKRKAHQKNLKIRHILLTGNLSKDKVISDLRD LVLNENDVLHIDIGDVYNVEIVDSLVFQIVILRYLSSLKCTISIPANHIYIEVANTFRERLRKKIPFTVMFRNEVLHWEN FDDFRISAEMFSPVQVVCAYLQHYSDLDSRDVQLHERRFTDEECRKLLQNKCRIGDRPSFYTINTFLCVLGEQLKKLSAS IFFRQENLKLMSKSRSEGVKRKLFDAIYSMAIDIAQRNIMGYNNDSEQEDILTEQSGRQIHWGDTNHMLIVFNNSNIETV SALFQGLDDVAQEIRDLFKYQLGNELVELHRLQQCELQNRIEKIIRTKDTLAETDPEYVLTADNILKMTLISQKIDSNIP IVIMGETGCGKTSLLRYLASLRDMCINVFSIHAGWSYEKIIQNIESVNEKCMNELEREFLLFLDEINTSEHVGLLCDIVL HHRIPNKTLAPNIILAAACNPYKIPSIEGQSPGLKYPDEGEVRGLLYNVYALPEVILDFVWDFGSLQKNDEYKYIERMVL NSLGDFKMDLKIVTALLARSQDHMRNSKQCVSLRDINRCTALTKWFQNTYLPSKREDDISSDSFMKAVLLSLCLCYHARL STTRERKELREDIANLMKDFTMYSDEDKIQNMWTTEQTYVLNNMQIGGDVAKNKVLKENVFALFVCVMNRIPICLIGEPG CSKSLSVQLLRSNLRGGDSPSAFLRKFPQTYFISFQGSESSSSEGIEDVFRIANEYQIASHXISKCNADLHQTAIAIYQN IAALEALCGEEEDLIKNLVQSHFKYTNNIFPRGFHGIRDFYGLIKFISNEKKRKASTFSKTQWDIVVKKGVARNYGGLAK ENENDHAFQAFFAENSECPELQNIIMDNLEDSFCRNLMLFAETDAVIWTIQNMLDKNKKQYEIIIGSRFDGDQGDNYHYR VLSRIIACMEQGRILILKDLDRIYGSLYDMLNQKYTKIGNSNHCRVALGAHSNPLCCISETFKCVVVTHPSFANNGKNVP FLGRFEKQNFELDDIVHHHLKKSVDEMNEILKRMQDNETYSRQMEEFHLTPIYSTRLLLTLIGSMQDEEREHECLKKKCY TKLAKVLNADGVLRILNSSVEGTERMIMENIKSIYFSLPIHNGLAFFIDKEIESVSLPSETNREETDNFNEMKAEISTEI NSSGVIEHDNQALFSSDSSLEFAACAKMNRLITVFTNSDIREEEYINELTYSSYTSFRIKDITSEKYIISKLKKFWSDKS QTSHCLIIECDQRTDMEHLLLIQSKIESYRKQYVQNFFQQIHRPKHVILIIFKDKRKAKSAFRTCNFMSSWETFSIDSLR KPNICLTDAYSMRVSDLLRNHKTNMFDVDQLFLAFTALDYKYSEQRCIETIKKIIVTLSTQDSLLDPLISRVLHFFEREE NIGSWLANIAYDRYILSQESTVSGAIEVYLRYKVRCLLAEVLQIVDDGFMLDEIIRRRSDEDFIKTWTSLTRNPEVVKLA GSVRNVMPKSLPISLTEVQIKLPFSIIFIERMDKLFEYFLESTHHYETDTKTKEERETCQTSHNMYSLAKTFVFERAKRI LEPLKH |
|