Gene
| Gene Model ID | pfu_aug1.0_15014.1_61445 |
|---|---|
| Locus | scaffold15014.1 : 1 ... 20049 : + |
| To GenomeBrowser | scaffold15014.1:1..20049 |
| Genes list of scaffold | scaffold15014.1 |
| Synonym | pfu_aug2.0_361.1_04063 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15014.1_61445.t1 | 2 | 1 | Ank_2 | 265 | 340 | 2.2e-14 | 53.5 | 1.9e-08 | 4.7e-05 | 23.6 |
| pfu_aug1.0_15014.1_61445.t1 | 3 | 1 | Ank | 312 | 341 | 2.9e-14 | 52.0 | 3.1e-08 | 7.6e-05 | 22.3 |
| pfu_aug1.0_15014.1_61445.t1 | 2 | 1 | Ank_4 | 312 | 374 | 1.0e-08 | 35.4 | 3.2e-07 | 0.00078 | 19.8 |
| pfu_aug1.0_15014.1_61445.t1 | 4 | 1 | Ank_3 | 312 | 339 | 3.5e-08 | 32.9 | 9.1e-06 | 0.022 | 14.9 |
| pfu_aug1.0_15014.1_61445.t1 | 3 | 2 | Ank | 353 | 429 | 2.9e-14 | 52.0 | 8.5e-06 | 0.021 | 14.6 |
| pfu_aug1.0_15014.1_61445.t1 | 4 | 2 | Ank_3 | 353 | 374 | 3.5e-08 | 32.9 | 0.072 | 180.0 | 2.8 |
| pfu_aug1.0_15014.1_61445.t1 | 2 | 2 | Ank_2 | 356 | 458 | 2.2e-14 | 53.5 | 1.0e-09 | 2.6e-06 | 27.6 |
| pfu_aug1.0_15014.1_61445.t1 | 2 | 2 | Ank_4 | 411 | 455 | 1.0e-08 | 35.4 | 4.7e-05 | 0.12 | 12.9 |
| pfu_aug1.0_15014.1_61445.t1 | 4 | 3 | Ank_3 | 413 | 427 | 3.5e-08 | 32.9 | 0.052 | 130.0 | 3.2 |
| pfu_aug1.0_15014.1_61445.t1 | 3 | 3 | Ank | 437 | 456 | 2.9e-14 | 52.0 | 0.0016 | 3.9 | 7.4 |
| pfu_aug1.0_15014.1_61445.t1 | 4 | 4 | Ank_3 | 437 | 456 | 3.5e-08 | 32.9 | 0.015 | 37.0 | 4.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15014.1_61445.t1 | gi|268581883|ref|XP_002645925.1| | Hypothetical protein CBG07688 [Caenorhabditis briggsae] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_15014.1_61445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15014.1_61445.t1 gtatgactgttacaccagtttcaaagacaagacatcccacaatgcatcgggacagtacaggaagtgagagcgaggatgag tcccgcagcacagatgatattatcagtctattggatagtctaaaaataggctcagagaaacctgctgtaaaacaggagaa agactattccagtgatttgatcagtaaaggtcctaaggatagttttatgagaagaggaccctatcctaccagcgagaccc caaatcgtcctatatccttcattccgtctcatcgtccaaacacgacctcattaaaatacgaaccgggtctgcatgaccta caatttccaaaatggaactacactcagtctgatagctttgccccaggacaaaatgatagttgccggtattggacaaaggc aaaacaagaaaatcgtctaccccaactaatgaaagagcagcaaaggttgtttgaatattacagaaatcaacgaaatcaaa agaggaacacttcttatacacagggaaggcagcaaaaaaaatccgcgttcacacaacggcaacaagataaaggttttgat gtgatagatggaatagatggacgagacgatgatctcagccaatcagattataacgtggagacttttccaaattcgagtac agtatgttcatcgcagaaagttcgagaagtggaagagtcgcagaaatctgagcctgcggaaaaatgttcaaggaaaagga cggagagtgattggagggaggagtgtaagccgtctccaccaaaacttgctgccaccgacccgatgtacgataaagacatt gacgaggacaatattcttcacagcctgataatagccaacgccagcccagaggtcatcgaggatgtactgaactgtttaaa gttagaagataacaatgtactggagagaataattaacgaacaaaatcaattactcaggacgccattgttcctagcagtga tggattgtaaaccagtgattgtccaaaccttactggaatacggtgctaatccaaacatccaaggaaaggttctcactata atggatgaatatgacttgagatcaccactccatctagtggcagaaatgggagatcaaggactacaactcctgcagattct gcttggctgtgagagaaccaatatagatcagaccagtgaaagtgattgtaagtgtttgatatgcatcactgatgtcacag gctatttaagggttaaaatcaacaacaacacgcagagctgctttaaaaccgtcaaaatgctactggataaaggtgcagat actgatatagtggaagaaacgacgagtaagactccagtcatgctggctatagagaccagggacatcgacctgattaagtt atttttagacgcggaggactctaccaaacaagcgttcattcacgacagattgcaagccattacaagagcaaaaaacatca ttgactaa |
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Protein
| Protein ID | pfu_aug1.0_15014.1_61445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15014.1_61445.t1 MTVTPVSKTRHPTMHRDSTGSESEDESRSTDDIISLLDSLKIGSEKPAVKQEKDYSSDLISKGPKDSFMRRGPYPTSETP NRPISFIPSHRPNTTSLKYEPGLHDLQFPKWNYTQSDSFAPGQNDSCRYWTKAKQENRLPQLMKEQQRLFEYYRNQRNQK RNTSYTQGRQQKKSAFTQRQQDKGFDVIDGIDGRDDDLSQSDYNVETFPNSSTVCSSQKVREVEESQKSEPAEKCSRKRT ESDWREECKPSPPKLAATDPMYDKDIDEDNILHSLIIANASPEVIEDVLNCLKLEDNNVLERIINEQNQLLRTPLFLAVM DCKPVIVQTLLEYGANPNIQGKVLTIMDEYDLRSPLHLVAEMGDQGLQLLQILLGCERTNIDQTSESDCKCLICITDVTG YLRVKINNNTQSCFKTVKMLLDKGADTDIVEETTSKTPVMLAIETRDIDLIKLFLDAEDSTKQAFIHDRLQAITRAKNII D |
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