Gene
| Gene Model ID | pfu_aug1.0_15.1_14687 |
|---|---|
| Locus | scaffold15.1 : 106456 ... 115694 : + |
| To GenomeBrowser | scaffold15.1:106456..115694 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug2.0_1371.1_05002 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15.1_14687.t1 | 1 | 1 | rve | 368 | 480 | 5.9e-26 | 90.9 | 4.5e-29 | 1.7e-25 | 89.4 |
| pfu_aug1.0_15.1_14687.t1 | 1 | 1 | BTB_2 | 780 | 873 | 1.4e-10 | 41.2 | 1.6e-13 | 5.8e-10 | 39.2 |
Transcript
| Transcript ID | pfu_aug1.0_15.1_14687.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15.1_14687.t1 atgggcaatggggagaatgacgtcattgaccacggttttggaacctatagttcacatttagtcatggatagtttgaacga ttcaggtgaaatcacattcaaaaacactacacaaaatatatattgtggcttggacaaatctccaaatcctcccaactgtg taggtgcaacacaatgcacaaatgccacaactcagtctgaaaatacaaatgaattattgtcatcaattcatacattaatt cagaatcaattttcgcaatttgataaagcaattaatgctcaattacatgaaatgaattgcaaaattgatggacagtttga ggaaatgcaaaatgctcttgatcaagttagaaatgaatcacaagtaagggaaaattcagattcaactccctataactgta ctccacccccacgcatagactttgagggccccagtagcagacctcctttccctatacacaacaatacacatagcaacaga aatttttctagtgcaggtaatggggacaatgttaggtttactaattcaaacacacatctagggcatagtaccaatgtaaa tagccaacaaaaatcaaatgcaaagcctaggaaatacgacggtaatgatgattttggtgaatacctttcccagtttgaaa tcattgccgaaatcaatcaatgggactacaaaacaaaatccttgcaacttgcaggtgttcttacgggacaagcagtagga gtcctaggtgaacttagccctacgcaacgtagagactatgatacccttgttaatgctttaaatacaagatttgggtccct tgaacgtggtgaactctacagagctcgcttaaaggtcctaaaattagacaagggtcaaaatctctcacagcttgcacaag aggtaaagaaactgacacgtcaggcttatcctcatgcaaatagaaatatgcttgacatattatcccttgattactacatt gatgctttacctgacccagacatacgtttgcgcatcagggaatcaagacctcaaaacattactgaggctgagacattagc tgtcagaaaagggtccactaaacagcctaaatctcccctacaaagaaatcttgtgggtgtcccaatggagagaatagctg ttgatgtattgggacccctcccattaagtaagaagaaaaattcttacttattagtggttggagatagctttacaaaatgg attgacgctattcctatcaaaaatcaaaaagcaacaactattgctcagaaaattattgaccgcattgttacaatatttgg cataccaatgcagattcattctgatcaaggtcgatcatttgagtcatccatttttcaagaaatgtgcaatcttctcggaa ttgagaagacacgatctactccttacagaccacaatcaaatggcatgatagagcgagctaatcaaacaatagcaaatatg ctaactgcatttgtgaacaaaaaccaaaatgattgggatgaattaatacctatactaatgatggcctacaggtcttctgt acaagaatcaacaggtttctccagattcagatgtcgtctttgtggggacgcaaggcatttttcgtctcgccagcaagcgg aaaggcatgtcgtaactatgcactctggatttgcatattcttgcaatcactgcaaacatctctccaacttgaagtatgat aaaaggcatacctgcgcagggggagcagaggccggcagatctttggttaaacgggcaacaatgacatgtacacccgaaga actgcaggagtataatgattacttcaaggtccgagcatctcacgtggaacagtacatggtagaacgggagatacccatgt ctgacagaccatcaatgaaaggggccatggtaccaatcagaaagaggactatgccaacgaagcctcaccacatgggcaag aaaaagaaaacagttggaacagacaaccttgcaattacgatccagaacgtagcatctaatattaacaccccttctccagc tgttcaggatttagcgttatcagaatctgaggaagagtctcctgatgttactatacaggtaacctgtgagtccagcagta aggacttacaagctgaagtcactgaggatgatacagaccatgacgagatccaggtaaccgtagatgcttatggtgatggg tcacagacaagtaccgttattgaaccactccgcagagtgacttataatgatactttaatgcagactgaggcagtcagctg caatgacatctctgcacagactgatgatcaaggcaagcataatcaccacaatgctgcacagaaactaagggaccttgcga agagtcagcaaaccaaagttatcttgcagattggcaatgaatccttcacgacaagtgcaagtatcttaagtaaggaagaa tcagttctgtcaagaatgatcaagaaacattcacccctgcaaccttactttactcacaagatcatgacttacagcatcga tcgtgatccatcagccttttcatacatcttggattatctgagggtaggttcagaggaatgcatatccctgctgcctaaca acatgcgagaacttagacgactctacatggaagcctccttctacgagctgacaggattaaccagccttctggagaagaaa gtgctaaatcaactaaaaggactgtaa |
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Protein
| Protein ID | pfu_aug1.0_15.1_14687.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15.1_14687.t1 MGNGENDVIDHGFGTYSSHLVMDSLNDSGEITFKNTTQNIYCGLDKSPNPPNCVGATQCTNATTQSENTNELLSSIHTLI QNQFSQFDKAINAQLHEMNCKIDGQFEEMQNALDQVRNESQVRENSDSTPYNCTPPPRIDFEGPSSRPPFPIHNNTHSNR NFSSAGNGDNVRFTNSNTHLGHSTNVNSQQKSNAKPRKYDGNDDFGEYLSQFEIIAEINQWDYKTKSLQLAGVLTGQAVG VLGELSPTQRRDYDTLVNALNTRFGSLERGELYRARLKVLKLDKGQNLSQLAQEVKKLTRQAYPHANRNMLDILSLDYYI DALPDPDIRLRIRESRPQNITEAETLAVRKGSTKQPKSPLQRNLVGVPMERIAVDVLGPLPLSKKKNSYLLVVGDSFTKW IDAIPIKNQKATTIAQKIIDRIVTIFGIPMQIHSDQGRSFESSIFQEMCNLLGIEKTRSTPYRPQSNGMIERANQTIANM LTAFVNKNQNDWDELIPILMMAYRSSVQESTGFSRFRCRLCGDARHFSSRQQAERHVVTMHSGFAYSCNHCKHLSNLKYD KRHTCAGGAEAGRSLVKRATMTCTPEELQEYNDYFKVRASHVEQYMVEREIPMSDRPSMKGAMVPIRKRTMPTKPHHMGK KKKTVGTDNLAITIQNVASNINTPSPAVQDLALSESEEESPDVTIQVTCESSSKDLQAEVTEDDTDHDEIQVTVDAYGDG SQTSTVIEPLRRVTYNDTLMQTEAVSCNDISAQTDDQGKHNHHNAAQKLRDLAKSQQTKVILQIGNESFTTSASILSKEE SVLSRMIKKHSPLQPYFTHKIMTYSIDRDPSAFSYILDYLRVGSEECISLLPNNMRELRRLYMEASFYELTGLTSLLEKK VLNQLKGL |
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