Gene
| Gene Model ID | pfu_aug1.0_14726.1_46798 |
|---|---|
| Locus | scaffold14726.1 : 53703 ... 70425 : - |
| To GenomeBrowser | scaffold14726.1:53703..70425 |
| Genes list of scaffold | scaffold14726.1 |
| Synonym | pfu_aug2.0_87.1_23423 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14726.1_46798.t1 | 1 | 1 | Otopetrin | 74 | 271 | 2.1e-12 | 46.8 | 6.9e-16 | 2.6e-12 | 46.5 |
| pfu_aug1.0_14726.1_46798.t1 | 1 | 1 | MPC | 311 | 364 | 5.4e-20 | 71.5 | 3.9e-23 | 1.4e-19 | 70.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14726.1_46798.t1 | gi|242247139|ref|NP_001156180.1| | brain protein 44-like [Acyrthosiphon pisum] | 4.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14726.1_46798.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14726.1_46798.t1 atgatgtcaaccgattctccaacacagacttttgcagacgaaacgagaaatgatggataccaagagataaatacaaatcg acgcccctcttatgacaacagctacgatgatgactattatgcaagagaaagcgaccggctactaaattccatcaactgtt ctattgagaccagagctgatagacctagatccatgtcttttttcctatccattgctgcaggtcttattatgtcgatacca ctactggtggtgaccatgatcatgtctcgcaaattcggagaaaaacatgctattcctgtaaacgcctatagaaccgtgga ggcaatcttcaacatctgccttctcattgtcgtttgttttggcttccactccttgcgcatgcaatgtcgagagtacagaa agaagccgatcacgtctgctgagtggttgctcattttcagtaactttggtctaggtatgtgtaggaccttcaacatagcc gcgtttttcctgagcaaagaaccccattctgcaatggacaccttcgtcttctgtcgccacttcgttgtgtttataaactc tttctggcaaaccattctcatcgtccaagcagggcgttacagaaaacttcatagaacaaatagagtatcaaggatcagtg ttgaaaactgcttcatggtacttcacatactaaacttcatgttgtggtttatttccatttttaccatcaaagatttgacc atggcctcgccggacgagcgcaacgtttacggaaagcaagtatgggacaatttcctcaaaattctttggcccataaatgt attctactgcttccactcatcaatggatcattacggactgtacaggagatttgacaagagatcacctttgccaaggaaaa tgtctgttgtatacagaactgtctgtggcataggggacaagattgtcccctccaagtttcaaccattttggaatcaccct gcaggaccaaaacacattcatttctgggcaccaacaatgaaatggagtttggtaattgctggtattggagatatagcaag acctgcagaaaaacttagtacatttcaatcatcagctctggcagcaacaggcccttcaacctataaattatttgagtttg gttgtaaaacatcagatactgaacttcatattcaacatcagtaa |
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Protein
| Protein ID | pfu_aug1.0_14726.1_46798.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14726.1_46798.t1 MMSTDSPTQTFADETRNDGYQEINTNRRPSYDNSYDDDYYARESDRLLNSINCSIETRADRPRSMSFFLSIAAGLIMSIP LLVVTMIMSRKFGEKHAIPVNAYRTVEAIFNICLLIVVCFGFHSLRMQCREYRKKPITSAEWLLIFSNFGLGMCRTFNIA AFFLSKEPHSAMDTFVFCRHFVVFINSFWQTILIVQAGRYRKLHRTNRVSRISVENCFMVLHILNFMLWFISIFTIKDLT MASPDERNVYGKQVWDNFLKILWPINVFYCFHSSMDHYGLYRRFDKRSPLPRKMSVVYRTVCGIGDKIVPSKFQPFWNHP AGPKHIHFWAPTMKWSLVIAGIGDIARPAEKLSTFQSSALAATGPSTYKLFEFGCKTSDTELHIQHQ |
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