Gene
| Gene Model ID | pfu_aug1.0_14616.1_54085 |
|---|---|
| Locus | scaffold14616.1 : 10129 ... 22267 : - |
| To GenomeBrowser | scaffold14616.1:10129..22267 |
| Genes list of scaffold | scaffold14616.1 |
| Synonym | pfu_aug2.0_2844.1_15646 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14616.1_54085.t1 | 1 | 1 | Aminotran_5 | 2 | 130 | 2.1e-28 | 99.1 | 4.9e-32 | 2.4e-28 | 98.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14616.1_54085.t1 | gi|260834967|ref|XP_002612481.1| | hypothetical protein BRAFLDRAFT_75405 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14616.1_54085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14616.1_54085.t1 gtgagctatgccgtagcaagaagatattcttccacactgatgctgctcaggccgtaggaaaaatccccatagacgttgac gatatgaagatagatctgatgtccatcagtggtcacaagatctatggacccaaaggtgttggagctctgtatgttagaag aagaccaagggttagaatagaagctccccagagtgggggtggtcaggagaggggaatgagaagtggaacagttccaacac ccctctgtgttggattgggatctgcctgtgagctggctatgaatgaaatggagtatgatcatcagagaatcaaagcttta tcagaccgtctgatcaacaaaatcaatgctgaactaccccaggtgataaggaatggtgaccctgaacaaacctacccagc ttgccgggacgaaaaagtccggagagctaatgctataccctcggtgtcgttgtcattgtcgtcgtcggtagacaaaactt taacctgggctgtatctcttgaactgtaa |
|
Protein
| Protein ID | pfu_aug1.0_14616.1_54085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14616.1_54085.t1 ELCRSKKIFFHTDAAQAVGKIPIDVDDMKIDLMSISGHKIYGPKGVGALYVRRRPRVRIEAPQSGGGQERGMRSGTVPTP LCVGLGSACELAMNEMEYDHQRIKALSDRLINKINAELPQVIRNGDPEQTYPACRDEKVRRANAIPSVSLSLSSSVDKTL TWAVSLEL |
|