Gene
| Gene Model ID | pfu_aug1.0_14475.1_61358 |
|---|---|
| Locus | scaffold14475.1 : 16476 ... 33705 : + |
| To GenomeBrowser | scaffold14475.1:16476..33705 |
| Genes list of scaffold | scaffold14475.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14475.1_61358.t1 | 3 | 1 | DUF773 | 4 | 37 | 0.0 | 167.1 | 4.2e-16 | 6.2e-12 | 45.0 |
| pfu_aug1.0_14475.1_61358.t1 | 3 | 2 | DUF773 | 36 | 166 | 0.0 | 167.1 | 7.0e-31 | 1.0e-26 | 93.8 |
| pfu_aug1.0_14475.1_61358.t1 | 3 | 3 | DUF773 | 201 | 258 | 0.0 | 167.1 | 4.2e-13 | 6.2e-09 | 35.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14475.1_61358.t1 | gi|291224216|ref|XP_002732101.1| | PREDICTED: CDK5 regulatory subunit-associated protein 3-like [Saccoglossus kowalevskii] | 4.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14475.1_61358.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14475.1_61358.t1 atgatgatagatatcaactacttccattgtaaaaagattgtagagctattaaaagatacagattccggaaaaaagaatat gtttggtcaatattcatcacaaaaaatgaagggaaaaaagataaagtcagagttattggccttagtgacggatctaccaa aggaatttaccagaatagctgagtcagcaaagtgtttacagccaggcataacatattacaacgactttgtcaaattcatg tttggaagtgaggaatctgagagtttgtcaatgatgacatatttacttcaaaacggtaacactacaacataccaatggcg tacaggtgacaaacctgaggtggtggaagaagccaagatatttatagatatcaccgatgagcaggacgctacagaaaatc ctgatgatattgactggggagatccgggtgcctttacagagtctggtgtagattttggtgatgaaatagacttcaacatg gcagatattaccatagaaacaggaggcatggaaggggaagtaactcagatgcttgtagtgctaagacaagagtttttgac tggattgcgaagcaaaatccggtttatgaattggcaaagtctgtatgttgacagacttaaagagtcgttaaagcaaaccc tgactcttgctgacaaaatggttttcttggaaaaagagatggtggtgaagcacaagaaagctgtagaggaacaaggggag ctggaaccaaaacttgatgtcatcatcaaacgcaccaaggaaatgcagcaacaggacgattttgccaaccaaaacaatta a |
|
Protein
| Protein ID | pfu_aug1.0_14475.1_61358.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14475.1_61358.t1 MMIDINYFHCKKIVELLKDTDSGKKNMFGQYSSQKMKGKKIKSELLALVTDLPKEFTRIAESAKCLQPGITYYNDFVKFM FGSEESESLSMMTYLLQNGNTTTYQWRTGDKPEVVEEAKIFIDITDEQDATENPDDIDWGDPGAFTESGVDFGDEIDFNM ADITIETGGMEGEVTQMLVVLRQEFLTGLRSKIRFMNWQSLYVDRLKESLKQTLTLADKMVFLEKEMVVKHKKAVEEQGE LEPKLDVIIKRTKEMQQQDDFANQNN |
|