Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14457.1_18128
Locus scaffold14457.1 : 2032 ... 7445 : -
To GenomeBrowser scaffold14457.1:2032..7445
Genes list of scaffold scaffold14457.1
Synonym pfu_aug2.0_1449.1_31692

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14457.1_18128.t1 1 1 P4Ha_N 13 55 5.1e-06 26.3 1.1e-09 8.1e-06 25.6

Transcript
Transcript IDpfu_aug1.0_14457.1_18128.t1
Definition-
>pfu_aug1.0_14457.1_18128.t1
atgatgtattttccagattttgatctaagttatcacgttgctgagaggcatttagatggccttccatcagatgctgacgt
ggaaggtgctaccaacagcattatacgtctttggaacgtttaccaattctctttgaaggacttcttcgatggtgttatat
ttggaacggaaacgaaaccacttagtgtaaaagaaattctttatattgcaagaaaagctgatgtaaatgacaatttgtac
gaagctttccattggctcaacgaactctataggcgattcaaaaatggagaatactcaaattcaggtgtgactgttgaaac
ggttgcaaaaactttggccggagtctataataggaatggaatgcctgataaatctttggaaatactagaggatttcaaac
aaggatcctgtgttaagacatttgggaatttttatctgatcaaataa

Protein
Protein IDpfu_aug1.0_14457.1_18128.t1
Definition-
>pfu_aug1.0_14457.1_18128.t1
MMYFPDFDLSYHVAERHLDGLPSDADVEGATNSIIRLWNVYQFSLKDFFDGVIFGTETKPLSVKEILYIARKADVNDNLY
EAFHWLNELYRRFKNGEYSNSGVTVETVAKTLAGVYNRNGMPDKSLEILEDFKQGSCVKTFGNFYLIK

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