Gene
| Gene Model ID | pfu_aug1.0_1421.1_15484 |
|---|---|
| Locus | scaffold1421.1 : 8865 ... 25135 : - |
| To GenomeBrowser | scaffold1421.1:8865..25135 |
| Genes list of scaffold | scaffold1421.1 |
| Synonym | pfu_aug2.0_2430.1_02128 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1421.1_15484.t1 | 1 | 1 | RRM_1 | 15 | 72 | 4.1e-20 | 71.1 | 1.7e-23 | 6.3e-20 | 70.5 |
| pfu_aug1.0_1421.1_15484.t1 | 1 | 1 | RRM_6 | 15 | 82 | 1.4e-17 | 63.4 | 7.3e-21 | 2.7e-17 | 62.4 |
| pfu_aug1.0_1421.1_15484.t1 | 1 | 1 | RRM_5 | 29 | 88 | 2.2e-07 | 30.6 | 9.4e-11 | 3.5e-07 | 29.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1421.1_15484.t1 | gi|291233573|ref|XP_002736726.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1421.1_15484.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1421.1_15484.t1 atggctaacaccattacacagaaggacactacctttaccaaaattttcgttggaggtttaccttatcacacaacggacaa atcattacgtgaattctttgataagtttggtgacatcgaggaagctgtagtaataacagacagacagacgggcaaaagcc ggggctatggattcgtcacgatggcaaaccgcgaggctgccgaacgggcatgtaaggatccaaacccgatcattgacggc aggaaagctaacgtaaatctagcgtatctgggagccaaaccaagagggatccccctggcagtgaagggtgtgcctggaat cctccccggtcagtttggatatccacagtacatttttccatctacggcatacgttgcagcgccctctaccgctagtttac taacggcagcatcggcagtcccgcaatcaccgctttctccaaccaccggcggacatctgatagactacactactgcttat gcgtcacaatttgctgctgccaacgctgggacatatgaagcggcaacatacccgtacgcatcaacaacaaacggattcgt gacgccagccggaactgcttacacatacgccgcagtaccgcagccagcaatcgtagcgggcggaagtacgatacattacc aacctcaacagttacaagagaggatgcaataa |
|
Protein
| Protein ID | pfu_aug1.0_1421.1_15484.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1421.1_15484.t1 MANTITQKDTTFTKIFVGGLPYHTTDKSLREFFDKFGDIEEAVVITDRQTGKSRGYGFVTMANREAAERACKDPNPIIDG RKANVNLAYLGAKPRGIPLAVKGVPGILPGQFGYPQYIFPSTAYVAAPSTASLLTAASAVPQSPLSPTTGGHLIDYTTAY ASQFAAANAGTYEAATYPYASTTNGFVTPAGTAYTYAAVPQPAIVAGGSTIHYQPQQLQERMQ |
|