Gene
| Gene Model ID | pfu_aug1.0_1391.1_07931 |
|---|---|
| Locus | scaffold1391.1 : 20986 ... 30773 : + |
| To GenomeBrowser | scaffold1391.1:20986..30773 |
| Genes list of scaffold | scaffold1391.1 |
| Synonym | pfu_aug2.0_85.1_16889 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1391.1_07931.t1 | 1 | 1 | DUF4066 | 8 | 166 | 1.1e-19 | 70.3 | 2.6e-23 | 1.3e-19 | 70.1 |
| pfu_aug1.0_1391.1_07931.t1 | 1 | 1 | DJ-1_PfpI | 31 | 168 | 3.2e-31 | 107.7 | 8.0e-35 | 4.0e-31 | 107.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1391.1_07931.t1 | gi|260831818|ref|XP_002610855.1| | hypothetical protein BRAFLDRAFT_94906 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1391.1_07931.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1391.1_07931.t1 atgccttcggccgttgtcattctcgctgaaggtgcagaggagatggagacagttataacagttgatgttctaaggagagg agagattgatgtaaccttagcagggctagcaggaagtgacccagtaacctgtagtcgcaatgttaagatcgtgcctgact gtagccttgatgatgccgtaaagaaaggtccgtatgatgtagttgtgtgtccagggggaggaaaaggtgccgaaaacctg ggagagtccagcaaagtaaaagaattactttcaagtcaagaaaaagagggcaggttaatcgctgcagtctgtgcagctcc cactgctttgaataaacatggaatagctaaaggtagtacagtgacatcacacccctctgttaaagataaactcactgaga gctacacatactctgaggaacgagtggtacagcatggcaaactgatcaccagtagagggcctggtacgtgcttcgagttc gctctcaaaatcgtagaagatttacaaggaaaagataaagctgataaactcgtcccacccatgctagtgaaaatgtga |
|
Protein
| Protein ID | pfu_aug1.0_1391.1_07931.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1391.1_07931.t1 MPSAVVILAEGAEEMETVITVDVLRRGEIDVTLAGLAGSDPVTCSRNVKIVPDCSLDDAVKKGPYDVVVCPGGGKGAENL GESSKVKELLSSQEKEGRLIAAVCAAPTALNKHGIAKGSTVTSHPSVKDKLTESYTYSEERVVQHGKLITSRGPGTCFEF ALKIVEDLQGKDKADKLVPPMLVKM |
|