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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1363.1_51301
Locus scaffold1363.1 : 5436 ... 12076 : +
To GenomeBrowser scaffold1363.1:5436..12076
Genes list of scaffold scaffold1363.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1363.1_51301.t1 1 1 7TM_GPCR_Srx 31 235 6.4e-14 51.7 2.3e-17 8.4e-14 51.3
pfu_aug1.0_1363.1_51301.t1 1 1 7TM_GPCR_Srsx 31 209 2.1e-07 30.3 8.1e-11 3.0e-07 29.8
pfu_aug1.0_1363.1_51301.t1 1 1 7tm_1 36 228 1.0e-26 93.6 3.4e-30 1.2e-26 93.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1363.1_51301.t1 gi|47227589|emb|CAG09586.1| unnamed protein product, partial [Tetraodon nigroviridis] 2.0e-24

Transcript
Transcript IDpfu_aug1.0_1363.1_51301.t1
Definition-
>pfu_aug1.0_1363.1_51301.t1
atggaaaatgtaacatatctcgacacgagcagccagagctttgttactcagaaaataaacgaaagtatagttcctccaag
cctacagtttctgttcggatctggtgggaatatcattgctatagtgattctttttgttacatcaaaacgacacaaatgga
agccgttccaacgactggtatcagcacttgcattaactgatttatatggaaatatattggtctatccatttgttataaaa
cgttacgcatcggactttacatacgatttcccgtacgctttgtgtcagcatattacgttcacgttttctttcgcttttct
tgcatcagcaatgctagtcatgatgatgtcattagacagattcctcgcaattttgtttccttttgtgtacaatgtaccaa
ggaaaattctgcggactcatttgctaattataaccacttggttatcatcaggaatcatatccatccttcccattgcagga
gtggggaaggttaaattgttttatccaggttcgtggtgttttattgactatgccaataaagagaactatggtgaaataat
gacttacatctatgccataattggcattgttgttttcattcttacactttctttgaacgtttgtgttatttttgctataa
gtcgcaaaatttacgttcatcgaaaaagacttggctcacagaaaagattaaaatcagacatttatgttattttttcttgc
ttgccatcgtcattgtcttcagtatatgctggatgcccttga

Protein
Protein IDpfu_aug1.0_1363.1_51301.t1
Definition-
>pfu_aug1.0_1363.1_51301.t1
MENVTYLDTSSQSFVTQKINESIVPPSLQFLFGSGGNIIAIVILFVTSKRHKWKPFQRLVSALALTDLYGNILVYPFVIK
RYASDFTYDFPYALCQHITFTFSFAFLASAMLVMMMSLDRFLAILFPFVYNVPRKILRTHLLIITTWLSSGIISILPIAG
VGKVKLFYPGSWCFIDYANKENYGEIMTYIYAIIGIVVFILTLSLNVCVIFAISRKIYVHRKRLGSQKRLKSDIYVIFSC
LPSSLSSVYAGCP

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