Gene
Gene Model ID | pfu_aug1.0_1363.1_51301 |
---|---|
Locus | scaffold1363.1 : 5436 ... 12076 : + |
To GenomeBrowser | scaffold1363.1:5436..12076 |
Genes list of scaffold | scaffold1363.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1363.1_51301.t1 | 1 | 1 | 7TM_GPCR_Srx | 31 | 235 | 6.4e-14 | 51.7 | 2.3e-17 | 8.4e-14 | 51.3 |
pfu_aug1.0_1363.1_51301.t1 | 1 | 1 | 7TM_GPCR_Srsx | 31 | 209 | 2.1e-07 | 30.3 | 8.1e-11 | 3.0e-07 | 29.8 |
pfu_aug1.0_1363.1_51301.t1 | 1 | 1 | 7tm_1 | 36 | 228 | 1.0e-26 | 93.6 | 3.4e-30 | 1.2e-26 | 93.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1363.1_51301.t1 | gi|47227589|emb|CAG09586.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 2.0e-24 |
Transcript
Transcript ID | pfu_aug1.0_1363.1_51301.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1363.1_51301.t1 atggaaaatgtaacatatctcgacacgagcagccagagctttgttactcagaaaataaacgaaagtatagttcctccaag cctacagtttctgttcggatctggtgggaatatcattgctatagtgattctttttgttacatcaaaacgacacaaatgga agccgttccaacgactggtatcagcacttgcattaactgatttatatggaaatatattggtctatccatttgttataaaa cgttacgcatcggactttacatacgatttcccgtacgctttgtgtcagcatattacgttcacgttttctttcgcttttct tgcatcagcaatgctagtcatgatgatgtcattagacagattcctcgcaattttgtttccttttgtgtacaatgtaccaa ggaaaattctgcggactcatttgctaattataaccacttggttatcatcaggaatcatatccatccttcccattgcagga gtggggaaggttaaattgttttatccaggttcgtggtgttttattgactatgccaataaagagaactatggtgaaataat gacttacatctatgccataattggcattgttgttttcattcttacactttctttgaacgtttgtgttatttttgctataa gtcgcaaaatttacgttcatcgaaaaagacttggctcacagaaaagattaaaatcagacatttatgttattttttcttgc ttgccatcgtcattgtcttcagtatatgctggatgcccttga |
Protein
Protein ID | pfu_aug1.0_1363.1_51301.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1363.1_51301.t1 MENVTYLDTSSQSFVTQKINESIVPPSLQFLFGSGGNIIAIVILFVTSKRHKWKPFQRLVSALALTDLYGNILVYPFVIK RYASDFTYDFPYALCQHITFTFSFAFLASAMLVMMMSLDRFLAILFPFVYNVPRKILRTHLLIITTWLSSGIISILPIAG VGKVKLFYPGSWCFIDYANKENYGEIMTYIYAIIGIVVFILTLSLNVCVIFAISRKIYVHRKRLGSQKRLKSDIYVIFSC LPSSLSSVYAGCP |