Gene
| Gene Model ID | pfu_aug1.0_1342.1_65962 |
|---|---|
| Locus | scaffold1342.1 : 4762 ... 20505 : - |
| To GenomeBrowser | scaffold1342.1:4762..20505 |
| Genes list of scaffold | scaffold1342.1 |
| Synonym | pfu_aug2.0_793.1_11186 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1342.1_65962.t1 | 9 | 1 | Adipokin_hormo | 32 | 41 | 7.6e-11 | 41.9 | 0.00049 | 7.2 | 6.8 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 2 | Adipokin_hormo | 57 | 65 | 7.6e-11 | 41.9 | 0.00065 | 9.6 | 6.4 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 3 | Adipokin_hormo | 74 | 85 | 7.6e-11 | 41.9 | 0.00054 | 8.0 | 6.6 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 4 | Adipokin_hormo | 92 | 101 | 7.6e-11 | 41.9 | 0.00021 | 3.1 | 8.0 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 5 | Adipokin_hormo | 110 | 117 | 7.6e-11 | 41.9 | 0.00073 | 11.0 | 6.2 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 6 | Adipokin_hormo | 130 | 137 | 7.6e-11 | 41.9 | 0.00089 | 13.0 | 5.9 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 7 | Adipokin_hormo | 148 | 155 | 7.6e-11 | 41.9 | 0.0007 | 10.0 | 6.3 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 8 | Adipokin_hormo | 175 | 181 | 7.6e-11 | 41.9 | 0.0013 | 19.0 | 5.4 |
| pfu_aug1.0_1342.1_65962.t1 | 9 | 9 | Adipokin_hormo | 198 | 211 | 7.6e-11 | 41.9 | 0.0036 | 54.0 | 4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1342.1_65962.t1 | gi|74766145|sp|Q25461.1|ARNP_MYTED | APGW-amide-related neuropeptide [Mytilus edulis] | 2.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1342.1_65962.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1342.1_65962.t1 atggaagtgacaaagtttcttcttctttgtacagctattgctcaacatttgattctagtgtcgtcggatggggaactgat agacaaaagaagaccaggatggggcaagcgtaatgttgataacttagtagacgatgaagacgattatgtggaggcagaaa aaagaaaacctggttggggtaaacgctctgatattgatagtcagatggacaaaagaaaaccagggtggggaaaacgcgat ttttctgaaataggtgaaatagataagcgaaaacctggttggggaaaaagatctatggatgatcttaataacataattaa gcgtcgccctgggtggggaaaacgatcaggagatttgtatgatgctttacaaatgtataaaagaagaccagggtggggca aaagaagtttccctgaaagtctcatattggacaagaggcgcccagggtggggaaaaagaagctttgtagacatttttgac actgctgaagacaatgacacctcagatataaataaaagaagacccggatgggggaaaagatcggacattttttcagtgga aaggagacgccctggatggggtaagagagcgccaggatggggcaaacgatcggatctcgtggacaattgtgagcttatag atttggaagttgaaaggctgttgcaagaaattcagaagattgaggaatatagattacaacaatgtggaacgccctcagaa gatggcatcactgtccctgcctacaactaa |
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Protein
| Protein ID | pfu_aug1.0_1342.1_65962.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1342.1_65962.t1 MEVTKFLLLCTAIAQHLILVSSDGELIDKRRPGWGKRNVDNLVDDEDDYVEAEKRKPGWGKRSDIDSQMDKRKPGWGKRD FSEIGEIDKRKPGWGKRSMDDLNNIIKRRPGWGKRSGDLYDALQMYKRRPGWGKRSFPESLILDKRRPGWGKRSFVDIFD TAEDNDTSDINKRRPGWGKRSDIFSVERRRPGWGKRAPGWGKRSDLVDNCELIDLEVERLLQEIQKIEEYRLQQCGTPSE DGITVPAYN |
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